RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
PTPRA-205ENST00000399903 TULP3O75386 442 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 CLCN5P51795 746 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 PRKCZQ05513 592 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 RGMBQ6NW40 437 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 UBASH3BQ8TF42 649 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 SARS2Q9NP81 518 aaKnown RBP16.77■□□□□ 0.28
PTPRA-205ENST00000399903 TMLHEQ9NVH6 421 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 CDH9Q9ULB4 789 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 PADI3Q9ULW8 664 aa16.77■□□□□ 0.28
PTPRA-205ENST00000399903 PRSS23O95084 383 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 GADD45AP24522 165 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 GRK3P35626 688 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 PIK3CGP48736 1102 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 WNT3AP56704 352 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 SPANXN2Q5MJ10 180 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 PHYKPLQ8IUZ5 450 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 TCAIMQ8N3R3 496 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF419Q96HQ0 510 aaPredicted RBP16.77■□□□□ 0.27
PTPRA-205ENST00000399903 NEDD4LQ96PU5 975 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 KIF17Q9P2E2 1029 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 NOD1Q9Y239 953 aa16.77■□□□□ 0.27
PTPRA-205ENST00000399903 SLC12A8A0AV02 714 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CENPBD1B2RD01 187 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ASGR1P07306 291 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 EPHA2P29317 976 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 PNPLA4P41247 253 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 PGFP49763 221 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CDC42EP1Q00587 391 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 EMX2Q04743 252 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 NR6A1Q15406 480 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 BCL7AQ4VC05 210 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 SGO1Q5FBB7 561 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF691Q5VV52 312 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 DENND5AQ6IQ26 1287 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CES5AQ6NT32 575 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 OMA1Q96E52 524 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 GTF2IRD1Q9UHL9 959 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 LOC110117498-PIK3R3F6TDL0 507 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 MATN4O95460 622 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 HLA-DQB2P05538 268 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 PRSS56P0CW18 603 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CCR1P32246 355 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 DCTP40126 519 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CD83Q01151 205 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 FOXM1Q08050 763 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CDC20Q12834 499 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF181Q2M3W8 571 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 LAIR1Q6GTX8 287 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 GALNT10Q86SR1 603 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
PTPRA-205ENST00000399903 KATNAL1Q9BW62 490 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 POLR3HQ9Y535 204 aaPredicted RBP16.76■□□□□ 0.27
PTPRA-205ENST00000399903 RGS13O14921 159 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 EEDO75530 441 aaKnown RBP16.76■□□□□ 0.27
PTPRA-205ENST00000399903 KRT6CP48668 564 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 PPP2R2BQ00005 443 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CBX2Q14781 532 aaPredicted RBP16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ADHFE1Q8IWW8 467 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 CLHC1Q8NHS4 586 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 BLOC1S5Q8TDH9 187 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 TBATAQ96M53 351 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ADAM2Q99965 735 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 QPCTLQ9NXS2 382 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 VPS4AQ9UN37 437 aa16.76■□□□□ 0.27
PTPRA-205ENST00000399903 ISPDA4D126 451 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 SAGE2PA6NJ88 616 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 OR4F21O95013 312 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 G6PDP11413 515 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 PRKACBP22694 351 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 LIPAP38571 399 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 TSNQ15631 228 aaKnown RBP16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ARMC4Q5T2S8 1044 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 SIGIRRQ6IA17 410 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF544Q6NX49 715 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 NRARPQ7Z6K4 114 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 CNTN4Q8IWV2 1026 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ATG16L2Q8NAA4 619 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 YIPF6Q96EC8 236 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 KLHL5Q96PQ7 755 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 VAT1Q99536 393 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 AIG1Q9NVV5 245 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 VAPAQ9P0L0 249 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 TRPV2Q9Y5S1 764 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 A0A096LPI6 279 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 C21orf33P30042 268 aaPredicted RBP16.75■□□□□ 0.27
PTPRA-205ENST00000399903 CYP2C18P33260 490 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 HTR2BP41595 481 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 NUDT6P53370 316 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 GEMP55040 296 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 KCNA10Q16322 511 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 GTDC1Q4AE62 458 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms