RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 KCNN3Q9UGI6 736 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 PACSIN3Q9UKS6 424 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
VGLL3-202ENST00000398399 FNDC3BQ53EP0 1204 aaKnown RBP13.54□□□□□ -0.24
VGLL3-202ENST00000398399 NR4A3Q92570 626 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 ABCD2Q9UBJ2 740 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 H3BRB1 525 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 SLC19A2O60779 497 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 PPM1BO75688 479 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 HMGN1P05114 100 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 MMP8P22894 467 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 FBXO16Q8IX29 292 aaPredicted RBP13.54□□□□□ -0.24
VGLL3-202ENST00000398399 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
VGLL3-202ENST00000398399 TUT1Q9H6E5 874 aaKnown RBP13.54□□□□□ -0.24
VGLL3-202ENST00000398399 FXYD6-FXYD2A0A087WZ82 144 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 DRICH1Q6PGQ1 229 aaPredicted RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ING5Q8WYH8 240 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 OSTF1Q92882 214 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 GAD1Q99259 594 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 FXYD6Q9H0Q3 95 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 DCLK1O15075 740 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ZNF781Q8N8C0 355 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 LRRC57Q8N9N7 239 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 MAP4K5Q9Y4K4 846 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 PCDHGA12O60330 932 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 JAM2P57087 298 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 MIPEPQ99797 713 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 SMARCB1Q12824 385 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 RAET1GQ6H3X3 334 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 CXorf40AQ8TE69 158 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ABCG1P45844 678 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 CXCR3P49682 368 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 SMSP52788 366 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 IFI44LQ53G44 452 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 MON1BQ7L1V2 547 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ELMO3Q96BJ8 720 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ZNF358Q9NW07 568 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 B8ZZF3 427 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 FMO3P31513 532 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 OR3A3P47888 321 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 OR3A2P47893 321 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 CMC1Q7Z7K0 106 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 HID1Q8IV36 788 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 NATD1Q8N6N6 113 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 SLC33A1O00400 549 aaPredicted RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 SSR2P43308 183 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 DAG1Q14118 895 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 HECTD2Q5U5R9 776 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
VGLL3-202ENST00000398399 RNF6Q9Y252 685 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 DAPL1A0PJW8 107 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 ITGB1P05556 798 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 MSANTD3Q96H12 275 aa13.53□□□□□ -0.24
VGLL3-202ENST00000398399 RECQL4O94761 1208 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 AGR2O95994 175 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 GABARAPL2P60520 117 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 ERVK-8P63133 956 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 PFKPQ01813 784 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 CYP1B1Q16678 543 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 AADACL4Q5VUY2 407 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 ZNF767PQ75MW2 155 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.24
VGLL3-202ENST00000398399 EXO5Q9H790 373 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 SNTG2Q9NY99 539 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 NDOR1Q9UHB4 597 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 GRIN2DO15399 1336 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 PTTG1O95997 202 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 OR10A6Q8NH74 314 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.24
VGLL3-202ENST00000398399 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 PLEKHA6Q9Y2H5 1048 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 MAGED1Q9Y5V3 778 aaPredicted RBP13.52□□□□□ -0.24
VGLL3-202ENST00000398399 KLF11O14901 512 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 ZBTB2Q8N680 514 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 STYXQ8WUJ0 223 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 SLC13A3Q8WWT9 602 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 C1orf109Q9NX04 203 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 ZIM2Q9NZV7 527 aa13.52□□□□□ -0.24
VGLL3-202ENST00000398399 LOC100130705A0A1B0GUX0 176 aa13.52□□□□□ -0.25
VGLL3-202ENST00000398399 TCRBV5S4A2TA0A5A2 114 aa13.52□□□□□ -0.25
VGLL3-202ENST00000398399 CLUP10909 449 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms