RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LILRA3Q8N6C8 439 aaPredicted RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 GABPB2Q8TAK5 448 aaPredicted RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 SEC14L1Q92503 715 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 EXTL1Q92935 676 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 PMEPA1Q969W9 287 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 RUNDC3BQ96NL0 473 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 MAP3K3Q99759 626 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 CTRCQ99895 268 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 TUBB2BQ9BVA1 445 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 CHRNA10Q9GZZ6 450 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 APMAPQ9HDC9 416 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 COL6A6A6NMZ7 2263 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SPAG6O75602 509 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 ZIC2O95409 532 aaPredicted RBP13.54□□□□□ -0.24
SEC13-204ENST00000397099 LIFP15018 202 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 POLR2CP19387 275 aaPredicted RBP13.54□□□□□ -0.24
SEC13-204ENST00000397099 CDH3P22223 829 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 MGAT1P26572 445 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PREPP48147 710 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SH3BP2P78314 561 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 KIAA0930Q6ICG6 404 aaPredicted RBP13.54□□□□□ -0.24
SEC13-204ENST00000397099 UNC5DQ6UXZ4 953 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PCGF5Q86SE9 256 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 LMNTD2Q8IXW0 634 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SLC22A15Q8IZD6 547 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 OR52E1Q8NGJ3 308 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 NAT14Q8WUY8 206 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SLC22A18Q96BI1 424 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PDLIM2Q96JY6 352 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PITPNM3Q9BZ71 974 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 FGF21Q9NSA1 209 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 SOHLH2Q9NX45 425 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PADI1Q9ULC6 663 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PCDHB3Q9Y5E6 796 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 PRSS21Q9Y6M0 314 aa13.54□□□□□ -0.24
SEC13-204ENST00000397099 FAM237BA0A1B0GVD1 139 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 PIPSLA2A3N6 862 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 GSAPA4D1B5 854 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 B8ZZF3 427 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 C21orf140B9A014 251 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 J3QKU1 62 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 OR1I1O60431 355 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 GPC4O75487 556 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 SLCO2B1O94956 709 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
SEC13-204ENST00000397099 PRDX3P30048 256 aaKnown RBP13.53□□□□□ -0.24
SEC13-204ENST00000397099 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
SEC13-204ENST00000397099 CYP4F2P78329 520 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 NFATC3Q12968 1075 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 PLEKHS1Q5SXH7 462 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 TTC27Q6P3X3 843 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 OTOAQ7RTW8 1153 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 OTUD6BQ8N6M0 293 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 PHC3Q8NDX5 983 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 LNPEPQ9UIQ6 1025 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
SEC13-204ENST00000397099 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 SMAPO00193 183 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 CPNE3O75131 537 aaKnown RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 KIAA0754O94854 1291 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 VAPBO95292 243 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 FKBP9O95302 570 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 ESR1P03372 595 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 FAM87AP0C7U9 286 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 FOLR1P15328 257 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 OGNP20774 298 aaKnown RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 AOAHP28039 575 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 NMBRP28336 390 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 ATP5DP30049 168 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 CCR7P32248 378 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 PPP1CAP62136 330 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 CRADDP78560 199 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 HSPA14Q0VDF9 509 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 KIR2DS3Q14952 304 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 TRIP13Q15645 432 aaPredicted RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 LINC00303Q3SY05 128 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 SYDE1Q6ZW31 735 aaPredicted RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 TIPARPQ7Z3E1 657 aaKnown RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 PRICKLE2Q7Z3G6 844 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 DCUN1D3Q8IWE4 304 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 PPIL6Q8IXY8 311 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 CALML6Q8TD86 181 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 MAGEC3Q8TD91 643 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 CPT1BQ92523 772 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 FOPNLQ96NB1 174 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 LRFN5Q96NI6 719 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms