RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 DLGAP3O95886 979 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 MT-ND3P03897 115 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 RPN2P04844 631 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 APOA4P06727 396 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 MGAT1P26572 445 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 ARNTP27540 789 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 AOAHP28039 575 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 NMBRP28336 390 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SHMT2P34897 504 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 CRADDP78560 199 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SEMA3AQ14563 771 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 TRIP13Q15645 432 aaPredicted RBP10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 TYSND1Q2T9J0 566 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SYTL3Q4VX76 610 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 TMTC4Q5T4D3 741 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 FAM92BQ6ZTR7 304 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SYDE1Q6ZW31 735 aaPredicted RBP10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 PCGF5Q86SE9 256 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 AMIGO1Q86WK6 493 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 PPP1R3BQ86XI6 285 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 PPIL6Q8IXY8 311 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SLC22A15Q8IZD6 547 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 CACNA2D3Q8IZS8 1091 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 ESX1Q8N693 406 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 IL22RA1Q8N6P7 574 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 NAT8LQ8N9F0 302 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SIDT2Q8NBJ9 832 aaKnown RBP10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 OR4E2Q8NGC2 313 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 OR5K2Q8NHB8 316 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 PMEPA1Q969W9 287 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 OR6C1Q96RD1 312 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 MAP3K3Q99759 626 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 PITPNM3Q9BZ71 974 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 P2RY12Q9H244 342 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SYBUQ9NX95 663 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 SAMD15Q9P1V8 674 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 GNPTGQ9UJJ9 305 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 POMT2Q9UKY4 750 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 CDYLQ9Y232 598 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 ASF1AQ9Y294 204 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 BTRCQ9Y297 605 aa10.78□□□□□ -0.68
NDUFA9-202ENST00000396655 EIF4E1BA6NMX2 242 aaKnown RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 SMAPO00193 183 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 AGRPO00253 132 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 MAP3K7O43318 606 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 RAD1O60671 282 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 RECKO95980 971 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 ESR1P03372 595 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 PRB1P04280 392 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 OGNP20774 298 aaKnown RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 CCR7P32248 378 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 PREPP48147 710 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 ARL4DP49703 201 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 SEPHS1P49903 392 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 GNG11P61952 73 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 TUBB4BP68371 445 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 FOXM1Q08050 763 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 TUBB2AQ13885 445 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 DUS1LQ6P1R4 473 aaKnown RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 UNC5DQ6UXZ4 953 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 HOOK3Q86VS8 718 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 OR52E1Q8NGJ3 308 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 TTC9Q92623 222 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 KIAA1143Q96AT1 154 aaPredicted RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 MFSD3Q96ES6 412 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 SLC45A3Q96JT2 553 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 SERPINB12Q96P63 405 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 NAT9Q9BTE0 207 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 TUBB2BQ9BVA1 445 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 APMAPQ9HDC9 416 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 INTS10Q9NVR2 710 aaKnown RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 MARCH4Q9P2E8 410 aaPredicted RBP10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 KLHL42Q9P2K6 505 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 SAR1BQ9Y6B6 198 aa10.77□□□□□ -0.69
NDUFA9-202ENST00000396655 CTAGE9A4FU28 777 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 C2orf74A8MZ97 194 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 ZNF185O15231 689 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 AVILO75366 819 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 SPAG6O75602 509 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 USP1O94782 785 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 TMEM63AO94886 807 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 POLR2CP19387 275 aaPredicted RBP10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 ATP5DP30049 168 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 VPS41P49754 854 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 SH3BP2P78314 561 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 MC1RQ01726 317 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 HSPA14Q0VDF9 509 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 TUBB3Q13509 450 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 TMED2Q15363 201 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 PPP1R7Q15435 360 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 ANKRD20A4Q4UJ75 823 aa10.76□□□□□ -0.69
NDUFA9-202ENST00000396655 PLEKHS1Q5SXH7 462 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms