RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 FBXL8Q96CD0 374 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 TOE1Q96GM8 510 aaKnown RBP12.41□□□□□ -0.42
TRIM39-204ENST00000396548 SEMA4BQ9NPR2 832 aaPredicted RBP12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CYP8B1Q9UNU6 501 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 HS3ST3A1Q9Y663 406 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 MLYCDO95822 493 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 HSPA7P48741 367 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 HNMTP50135 292 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 AMZ2Q86W34 360 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 TCAIMQ8N3R3 496 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 FAR2Q96K12 515 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 OR52B2Q96RD2 323 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 TIMM29Q9BSF4 260 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 TUBB1Q9H4B7 451 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 DLGAP2Q9P1A6 1054 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 SLC12A4Q9UP95 1085 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CA5BQ9Y2D0 317 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 DNAJC15Q9Y5T4 150 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 MUC3AQ02505 3323 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CAPN14A8MX76 684 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 H0Y8X5 98 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 H3BM21 787 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MYO1CO00159 1063 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 SDHDO14521 159 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ESRRBO95718 433 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ANXA5P08758 320 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CYP2A7P20853 494 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CD6P30203 668 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 BNIP1Q12981 228 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 TRAF3Q13114 568 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 GTF2H2Q13888 395 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CLEC6AQ6EIG7 209 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 GTF2H2CQ6P1K8 395 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ABI3BPQ7Z7G0 1075 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 PDZD3Q86UT5 571 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CLYBLQ8N0X4 340 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 HGH1Q9BTY7 390 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CCDC106Q9BWC9 280 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 NMUR2Q9GZQ4 415 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MID1IP1Q9NPA3 183 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MUTYHQ9UIF7 546 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 UBOX5O94941 541 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 S100BP04271 92 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 T-ENOLP0DO92 83 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 GDF5P43026 501 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ERVPABLB-1P60509 514 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MTAPQ13126 283 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 GRB7Q14451 532 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 NFATC4Q14934 902 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 CAPRIN2Q6IMN6 1127 aaKnown RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 GJD3Q8N144 294 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 OR52B6Q8NGF0 335 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 OR56A4Q8NGH8 313 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 KCNA7Q96RP8 456 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 NUF2Q9BZD4 464 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MRPL40Q9NQ50 206 aaKnown RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ARL15Q9NXU5 204 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 APOBEC2Q9Y235 224 aaKnown RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 TOR1BO14657 336 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 FPGTO14772 594 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 ZNF217O75362 1048 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 APBB3O95704 486 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 SERPINA6P08185 405 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 LRRC56Q8IYG6 542 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 MCOLN3Q8TDD5 553 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 BIRC7Q96CA5 298 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 PKP4Q99569 1192 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 NOL11Q9H8H0 719 aaKnown RBP12.4□□□□□ -0.42
TRIM39-204ENST00000396548 FGF22Q9HCT0 170 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
TRIM39-204ENST00000396548 K7EPI3 171 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 K7ESF4 209 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 FCHO1O14526 889 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 AZIN1O14977 448 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 BDKRB1P46663 353 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 PKNOX1P55347 436 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 PCDH1Q08174 1060 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 LETMD1Q6P1Q0 360 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 UNC5DQ6UXZ4 953 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 ERP27Q96DN0 273 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 CCDC138Q96M89 665 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 CCDC28BQ9BUN5 200 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 NTMT1Q9BV86 223 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 PRSS38A1L453 326 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-204ENST00000396548 KCNJ13O60928 360 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 YPEL5P62699 121 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 LSM12Q3MHD2 195 aaKnown RBP12.39□□□□□ -0.43
TRIM39-204ENST00000396548 METTL21CQ5VZV1 264 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 LRRC70Q7Z2Q7 622 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
TRIM39-204ENST00000396548 TEX9Q8N6V9 391 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms