RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TRIM13O60858 407 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 LYPLA1O75608 230 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 PIRTP0C851 137 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 T-ENOLP0DO92 83 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 ALOX15P16050 662 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 SAT1P21673 171 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 ARRB2P32121 409 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 RPIAP49247 311 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 SUOXP51687 545 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 UCNP55089 124 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 DLG1Q12959 904 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 C1orf61Q13536 156 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 IRF4Q15306 451 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 C3orf38Q5JPI3 329 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 HECTD2Q5U5R9 776 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 CRTC1Q6UUV9 634 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 CBARPQ8N350 705 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 FSTL5Q8N475 847 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 OR4K2Q8NGD2 314 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 OR13C4Q8NGS5 318 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 PIWIL2Q8TC59 973 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 KCNE4Q8WWG9 221 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 NAT6Q93015 286 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 TSPAN17Q96FV3 270 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 OLFM1Q99784 485 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 WRAP53Q9BUR4 548 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 WWP1Q9H0M0 922 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 OXSMQ9NWU1 459 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 IL17CQ9P0M4 197 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 RUVBL2Q9Y230 463 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 DNAJC16Q9Y2G8 782 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 ENTPD2Q9Y5L3 495 aa17.15■□□□□ 0.34
TNFSF13-205ENST00000396545 TENM4Q6N022 2769 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 YY2O15391 372 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 CD3EAPO15446 510 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 ANXA6P08133 673 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 CYP2A6P11509 494 aaPredicted RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 SERPINB3P29508 390 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 KPNA2P52292 529 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 PGGT1BP53609 377 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 SLC12A2P55011 1212 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 TMPRSS3P57727 454 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 ZNF460Q14592 562 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 PTPRCAPQ14761 206 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 TYSND1Q2T9J0 566 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 TMEM52BQ4KMG9 183 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 AARS2Q5JTZ9 985 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 WDR75Q8IWA0 830 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 PPP4R1Q8TF05 950 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 SREK1Q8WXA9 508 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 GLMNQ92990 594 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 NXNL1Q96CM4 212 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 SLC46A1Q96NT5 459 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 FAM96AQ9H5X1 160 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 IGSF5Q9NSI5 407 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 CATSPERZQ9NTU4 200 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 INTS10Q9NVR2 710 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 APPL1Q9UKG1 709 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 PCDHGA8Q9Y5G5 932 aa17.14■□□□□ 0.33
TNFSF13-205ENST00000396545 CASC3O15234 703 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 CELA2BP08218 269 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 ZNF30P17039 623 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 SLC26A3P40879 764 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 PDX1P52945 283 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 ELP6Q0PNE2 266 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 BROXQ5VW32 411 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 LIPMQ5VYY2 423 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 FAM45BPQ6NSW5 357 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 RAVER1Q8IY67 606 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 FAM45AQ8TCE6 357 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 PRR11Q96HE9 360 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 NDNQ99608 321 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 DPH1Q9BZG8 443 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 SUDS3Q9H7L9 328 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 CPNE5Q9HCH3 593 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
TNFSF13-205ENST00000396545 C1orf232A0A0U1RR37 186 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 ERVH48-1M5A8F1 160 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 BUD23O43709 281 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 NQO1P15559 274 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 CTPS1P17812 591 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 AQP5P55064 265 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 SEMA3AQ14563 771 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 KRT72Q14CN4 511 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 KIF26BQ2KJY2 2108 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 WSCD2Q2TBF2 565 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 TBC1D1Q86TI0 1168 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 ZNF843Q8N446 348 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 WDR48Q8TAF3 677 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 INPP5DQ92835 1189 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 KLHL29Q96CT2 875 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 SCYL1Q96KG9 808 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 TTC1Q99614 292 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms