RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ACOT9Q9Y305 439 aa20.78■□□□□ 0.92
FXN-202ENST00000396364 PCDHGA1Q9Y5H4 931 aa20.78■□□□□ 0.92
FXN-202ENST00000396364 CFAP20Q9Y6A4 193 aaKnown RBP20.78■□□□□ 0.92
FXN-202ENST00000396364 RNF215Q9Y6U7 377 aa20.78■□□□□ 0.92
FXN-202ENST00000396364 LILRA5A6NI73 299 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 RASGRF2O14827 1237 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 ZBTB14O43829 449 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 MATN4O95460 622 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 MPOP05164 745 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 E2F1Q01094 437 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 SP140Q13342 867 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 GUSBP11Q6P575 273 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 TMEM26Q6ZUK4 368 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 ZNF438Q7Z4V0 828 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 CEP97Q8IW35 865 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 PHC3Q8NDX5 983 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 OR10G6Q8NH81 332 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 EEF1AKMT1Q8WVE0 214 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 CCDC74AQ96AQ1 378 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 RAD51AP1Q96B01 352 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 AHCYL2Q96HN2 611 aaKnown RBP20.77■□□□□ 0.92
FXN-202ENST00000396364 TRIM54Q9BYV2 358 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 ABCG4Q9H172 646 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 KIR3DX1Q9H7L2 352 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 SNX15Q9NRS6 342 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 KCNK4Q9NYG8 393 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 APOBEC2Q9Y235 224 aaKnown RBP20.77■□□□□ 0.92
FXN-202ENST00000396364 PLAAQ9Y263 795 aa20.77■□□□□ 0.92
FXN-202ENST00000396364 TRIM49D1C9J1S8 452 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 TM4SF5O14894 197 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 PPM1DO15297 605 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 SLC16A5O15375 505 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 PHGDHO43175 533 aaKnown RBP20.76■□□□□ 0.91
FXN-202ENST00000396364 SHBGP04278 402 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 HIST1H2AGP0C0S8 130 aaPredicted RBP20.76■□□□□ 0.91
FXN-202ENST00000396364 HIST1H2ADP20671 130 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 CYP2A7P20853 494 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 NOVA1P51513 510 aaKnown RBP20.76■□□□□ 0.91
FXN-202ENST00000396364 ATP6V0D1P61421 351 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 GPLD1P80108 840 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 TIAL1Q01085 375 aaKnown RBP eCLIP20.76■□□□□ 0.91
FXN-202ENST00000396364 NR1D2Q14995 579 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 HIST1H2AHQ96KK5 128 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 HIST1H2AJQ99878 128 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 H2AFJQ9BTM1 129 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 RAB11FIP5Q9BXF6 653 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 ZMYND15Q9H091 742 aa20.76■□□□□ 0.91
FXN-202ENST00000396364 TSR3Q9UJK0 312 aaKnown RBP20.76■□□□□ 0.91
FXN-202ENST00000396364 GOLGA4Q13439 2230 aaKnown RBP20.76■□□□□ 0.91
FXN-202ENST00000396364 LY6G6EA0A0G2JKS1 128 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 TLDC2A0PJX2 215 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 SMIM23A6NLE4 172 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 RFPL3O75679 317 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 KRT15P19012 456 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 ALDH4A1P30038 563 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 ACADVLP49748 655 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 GPR18Q14330 331 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 CLPPQ16740 277 aaPredicted RBP20.75■□□□□ 0.91
FXN-202ENST00000396364 FAM83EQ2M2I3 478 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 BEND6Q5SZJ8 279 aaPredicted RBP20.75■□□□□ 0.91
FXN-202ENST00000396364 DUS1LQ6P1R4 473 aaKnown RBP20.75■□□□□ 0.91
FXN-202ENST00000396364 KLC3Q6P597 504 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 UBE2R2Q712K3 238 aaPredicted RBP20.75■□□□□ 0.91
FXN-202ENST00000396364 SFTPA2Q8IWL1 248 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 OR5AR1Q8NGP9 310 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 MCOLN3Q8TDD5 553 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 RUFY1Q96T51 708 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 CCDC3Q9BQI4 270 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 HGH1Q9BTY7 390 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 TBK1Q9UHD2 729 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 TDRKHQ9Y2W6 561 aaKnown RBP20.75■□□□□ 0.91
FXN-202ENST00000396364 U3KQA8 63 aa20.75■□□□□ 0.91
FXN-202ENST00000396364 A0A096LPK6 155 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 FAM221BA6H8Z2 402 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ZNF839A8K0R7 811 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 DUX1O43812 170 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 PSIP1O75475 530 aaKnown RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 C1orf105O95561 183 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ENO2P09104 434 aaPredicted RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 CCDC166P0CW27 439 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 MYF5P13349 255 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 GCAP28676 217 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 SHMT2P34897 504 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 SLCO1A2P46721 670 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 KPNA2P52292 529 aaKnown RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 DNAH14Q0VDD8 3507 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ZNF460Q14592 562 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 TIFABQ6ZNK6 161 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 PIWIL4Q7Z3Z4 852 aaKnown RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 CMC1Q7Z7K0 106 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ADAMTSL2Q86TH1 951 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 FBXO15Q8NCQ5 510 aaPredicted RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 ACMSDQ8TDX5 336 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 EPS8L3Q8TE67 593 aaKnown RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 LCN9Q8WX39 176 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ASB11Q8WXH4 323 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 ISL2Q96A47 359 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 DPYSL5Q9BPU6 564 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 TMEM109Q9BVC6 243 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 DERL2Q9GZP9 239 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms