RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CKAP5Q14008 2032 aa21.68■■□□□ 1.06
HMGA2-203ENST00000393578 FBP2O00757 339 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 NRP2O60462 931 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 LILRB5O75023 590 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 PSMG1O95456 288 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 MAP4P27816 1152 aaKnown RBP21.67■■□□□ 1.06
HMGA2-203ENST00000393578 TIE1P35590 1138 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 HTR6P50406 440 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 DIO3P55073 304 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 C6orf136Q5SQH8 315 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 REP15Q6BDI9 236 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 HPS6Q86YV9 775 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 EZH1Q92800 747 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-203ENST00000393578 TICRRQ7Z2Z1 1910 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 BBIP1A8MTZ0 92 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 LOC730098B7Z3J9 87 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 H0Y3Z8 333 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 LIN7AO14910 233 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-203ENST00000393578 VEGFDO43915 354 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 WDR47O94967 919 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 PREPP48147 710 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 SEC13P55735 322 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 TAS2R38P59533 333 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 ABRQ12979 859 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 GTF2H3Q13889 308 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 LRP8Q14114 963 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 COL19A1Q14993 1142 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 ABRAXAS2Q15018 415 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 PTCHD3Q3KNS1 767 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-203ENST00000393578 TRAPPC5Q8IUR0 188 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 FBXL8Q96CD0 374 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 HIC2Q96JB3 615 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 CDRT15Q96T59 188 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 SLC29A3Q9BZD2 475 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 BRINP2Q9C0B6 783 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 ATXN10Q9UBB4 475 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 GPR34Q9UPC5 381 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 POMPQ9Y244 141 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 RNF11Q9Y3C5 154 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 MTCH2Q9Y6C9 303 aa21.67■■□□□ 1.06
HMGA2-203ENST00000393578 KRT36O76013 467 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 CLDN9O95484 217 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 EPORP19235 508 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 ADAMTSL4Q6UY14 1074 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 SFRP1Q8N474 314 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 LILRA3Q8N6C8 439 aaPredicted RBP21.66■■□□□ 1.06
HMGA2-203ENST00000393578 LINC00615Q96LM1 132 aaPredicted RBP21.66■■□□□ 1.06
HMGA2-203ENST00000393578 GULP1Q9UBP9 304 aa21.66■■□□□ 1.06
HMGA2-203ENST00000393578 IGLON5A6NGN9 336 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 ARHGEF33A8MVX0 844 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 CATP04040 527 aaKnown RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 PBLDP30039 288 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 NME5P56597 212 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 RCN1Q15293 331 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 C2orf27AQ580R0 203 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 PIGGQ5H8A4 983 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 ZNF776Q68DI1 518 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 HACD2Q6Y1H2 254 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 CACUL1Q86Y37 369 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 HDDC3Q8N4P3 179 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 FNDC5Q8NAU1 212 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 CCDC124Q96CT7 223 aaKnown RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 FOPNLQ96NB1 174 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 ACTR8Q9H981 624 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 TMEM45AQ9NWC5 275 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 NOP53Q9NZM5 478 aaKnown RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 MRASO14807 208 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 LSM1O15116 133 aaKnown RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 ULK1O75385 1050 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 SORBS2O94875 1100 aaKnown RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 CCR3P51677 355 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 AAK1Q2M2I8 961 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 PNCKQ6P2M8 343 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 MYLK4Q86YV6 388 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-203ENST00000393578 EFCAB3Q8N7B9 438 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 TSPEARQ8WU66 669 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 ATL1Q8WXF7 558 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 COX14Q96I36 57 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 CCDC138Q96M89 665 aa21.65■■□□□ 1.06
HMGA2-203ENST00000393578 C17orf113A0A1B0GUU1 675 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 H3BM21 787 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 CFLARO15519 480 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 PCDH8O95206 1070 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 NTSR1P30989 418 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 CTHP32929 405 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 EMX2Q04743 252 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 AGERQ15109 404 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 NR6A1Q15406 480 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 CCDC6Q16204 474 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 GGTA1PQ4G0N0 100 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 PDCD4Q53EL6 469 aaKnown RBP21.64■■□□□ 1.05
HMGA2-203ENST00000393578 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.64■■□□□ 1.05
HMGA2-203ENST00000393578 SDE2Q6IQ49 451 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 BLOC1S3Q6QNY0 202 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 TRIM46Q7Z4K8 759 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 PCYOX1LQ8NBM8 494 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 PLA2G15Q8NCC3 412 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 OR2T3Q8NH03 318 aa21.64■■□□□ 1.05
HMGA2-203ENST00000393578 GABRG3Q99928 467 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms