RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 PRKG2Q13237 762 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 DHX34Q14147 1143 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 TMED2Q15363 201 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 DNAJC21Q5F1R6 531 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 MANEAQ5SRI9 462 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 ARHGAP40Q5TG30 622 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 CYB5D1Q6P9G0 228 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 CCDC81Q6ZN84 652 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 AMIGO1Q86WK6 493 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 CILP2Q8IUL8 1156 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 AGGF1Q8N302 714 aaeCLIP11.5□□□□□ -0.57
RFC4-202ENST00000392481 SIDT2Q8NBJ9 832 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 OR5AR1Q8NGP9 310 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 OR5K2Q8NHB8 316 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 LPGAT1Q92604 370 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 NKD1Q969G9 470 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 BIRC8Q96P09 236 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 OR6C1Q96RD1 312 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 TRIM56Q9BRZ2 755 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 PILRAQ9UKJ1 303 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 POMT2Q9UKY4 750 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 TMEM184BQ9Y519 407 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 MAD1L1Q9Y6D9 718 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 ZCWPW2A0A1B0GU75 182 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 H3BMM5 538 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 BTN3A3O00478 584 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 BTN3A1O00481 513 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 EFSO43281 561 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 KDM1AO60341 852 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 ZBTB11O95625 1053 aaPredicted RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 ESR1P03372 595 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 SHMT2P34897 504 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 ARL4DP49703 201 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 KPNA2P52292 529 aaKnown RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 CSE1LP55060 971 aaKnown RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 HSD11B2P80365 405 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 THOC5Q13769 683 aaKnown RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 IZUMO3Q5VZ72 239 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 CENPUQ71F23 418 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 OTOAQ7RTW8 1153 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 BPHLQ86WA6 291 aaPredicted RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 VRK3Q8IV63 474 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 ADGRF3Q8IZF5 1079 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 KRT222Q8N1A0 295 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 D2HGDHQ8N465 521 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 STAMBPL1Q96FJ0 436 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 C1GALT1Q9NS00 363 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 INTS10Q9NVR2 710 aaKnown RBP11.49□□□□□ -0.57
RFC4-202ENST00000392481 ICKQ9UPZ9 632 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 SPTA1P02549 2419 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 SEC16AO15027 2179 aa11.49□□□□□ -0.57
RFC4-202ENST00000392481 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 GSAPA4D1B5 854 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 C2orf74A8MZ97 194 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 SMAPO00193 183 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 RAD1O60671 282 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 STK17BO94768 372 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 S1PR4O95977 384 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 RPN2P04844 631 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 FGF5P12034 268 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 FOLR1P15328 257 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 CDH3P22223 829 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 PRDX3P30048 256 aaKnown RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 FMO4P31512 558 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 ETF1P62495 437 aaKnown RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 ACY1Q03154 408 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 MORF4L2Q15014 288 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 LONRF1Q17RB8 773 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
RFC4-202ENST00000392481 CTSL3PQ5NE16 218 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 ZNF470Q6ECI4 717 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 UNC5DQ6UXZ4 953 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 VASH2Q86V25 355 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 LMNTD2Q8IXW0 634 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 NLGN4XQ8N0W4 816 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 NLGN4YQ8NFZ3 816 aaPredicted RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 CALML6Q8TD86 181 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 FCRL4Q96PJ5 515 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 NRTNQ99748 197 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 NAT9Q9BTE0 207 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 PITPNM3Q9BZ71 974 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 XKR8Q9H6D3 395 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 IL1RAPL1Q9NZN1 696 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 OR6C2Q9NZP2 312 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 BTRCQ9Y297 605 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 CRYL1Q9Y2S2 319 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 TDRKHQ9Y2W6 561 aaKnown RBP11.48□□□□□ -0.57
RFC4-202ENST00000392481 FAM169AQ9Y6X4 670 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 SPTBP11277 2137 aa11.48□□□□□ -0.57
RFC4-202ENST00000392481 SLC9B1P1A6NJY1 282 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms