RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NUSAP1Q9BXS6 441 aaKnown RBP14.02□□□□□ -0.16
RTF1-201ENST00000389629 TM6SF2Q9BZW4 377 aa14.02□□□□□ -0.16
RTF1-201ENST00000389629 CCDC59Q9P031 241 aaKnown RBP14.02□□□□□ -0.16
RTF1-201ENST00000389629 GABRDO14764 452 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 IRAK2O43187 625 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 CDK14O94921 469 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 MYCP01106 439 aaPredicted RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 YES1P07947 543 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 DUSP28Q4G0W2 176 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
RTF1-201ENST00000389629 PDE12Q6L8Q7 609 aaKnown RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 COLGALT2Q8IYK4 626 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 MFSD1Q9H3U5 465 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 POU2F3Q9UKI9 436 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 RNF6Q9Y252 685 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 FABP12A6NFH5 140 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 ZNF701M0R085 212 aaPredicted RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 ARVCFO00192 962 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 C1RP00736 705 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 MT-ND2P03891 347 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 PSKH1P11801 424 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 TYMPP19971 482 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 C4BPBP20851 252 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 MAGEA3P43357 314 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 CASP9P55211 416 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 CDH12P55289 794 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 MFSD14CQ5VZR4 134 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 MON1AQ86VX9 555 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 ZZZ3Q8IYH5 903 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 OR8H3Q8N146 312 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 TP63Q9H3D4 680 aaPredicted RBP14.02□□□□□ -0.17
RTF1-201ENST00000389629 TIGARQ9NQ88 270 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 NKIRAS2Q9NYR9 191 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 PCDHB9Q9Y5E1 797 aa14.02□□□□□ -0.17
RTF1-201ENST00000389629 CAPN3P20807 821 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 PTGS2P35354 604 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 HIST2H2ACQ16777 129 aaPredicted RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 HSF5Q4G112 596 aaPredicted RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 UNC50Q53HI1 259 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 SIRPB2Q5JXA9 342 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 CES4AQ5XG92 561 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 HIST2H2AA3Q6FI13 130 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 Q8N9G6 341 aaPredicted RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 NDNFQ8TB73 568 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 MAF1Q9H063 256 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 AGXTP21549 392 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 CSNK2BP67870 215 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 FOXM1Q08050 763 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 STARD3Q14849 445 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ELMOD2Q8IZ81 293 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ACDQ96AP0 544 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 FAM118AQ9NWS6 357 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 AGO1Q9UL18 857 aaKnown RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 PCDHGC4Q9Y5F7 938 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 SMIM30A4D0T7 59 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ACOX3O15254 700 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 NIPSNAP2O75323 286 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 RPL9P32969 192 aaKnown RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 GNG2P59768 71 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 GHRHRQ02643 423 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ARMC12Q5T9G4 340 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ATL1Q8WXF7 558 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 CYP2S1Q96SQ9 504 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 OSBPL10Q9BXB5 764 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 CMTM6Q9NX76 183 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 IGKV6-21A0A0C4DH24 114 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 DYRK3O43781 588 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ZNF280AP59817 542 aaPredicted RBP14.01□□□□□ -0.17
RTF1-201ENST00000389629 GTF2H2Q13888 395 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 GPR162Q16538 588 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 GTF2H2CQ6P1K8 395 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 C11orf88Q6PI97 169 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 HS3ST5Q8IZT8 346 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 BRSK1Q8TDC3 778 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 ARMC1Q9NVT9 282 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 CROCCQ5TZA2 2017 aa14.01□□□□□ -0.17
RTF1-201ENST00000389629 GSTM2P28161 218 aa14□□□□□ -0.17
RTF1-201ENST00000389629 ATP4BP51164 291 aa14□□□□□ -0.17
RTF1-201ENST00000389629 CD47Q08722 323 aa14□□□□□ -0.17
RTF1-201ENST00000389629 SPCS2Q15005 226 aa14□□□□□ -0.17
RTF1-201ENST00000389629 ZNF789Q5FWF6 425 aa14□□□□□ -0.17
RTF1-201ENST00000389629 CHPT1Q8WUD6 406 aa14□□□□□ -0.17
RTF1-201ENST00000389629 RANBP9Q96S59 729 aa14□□□□□ -0.17
RTF1-201ENST00000389629 MYOCQ99972 504 aa14□□□□□ -0.17
RTF1-201ENST00000389629 CLEC4AQ9UMR7 237 aa14□□□□□ -0.17
RTF1-201ENST00000389629 DNAJC15Q9Y5T4 150 aa14□□□□□ -0.17
RTF1-201ENST00000389629 FPGTO14772 594 aa14□□□□□ -0.17
RTF1-201ENST00000389629 KPNA5O15131 536 aa14□□□□□ -0.17
RTF1-201ENST00000389629 AQP9O43315 295 aa14□□□□□ -0.17
RTF1-201ENST00000389629 FGD2Q7Z6J4 655 aa14□□□□□ -0.17
RTF1-201ENST00000389629 ARRDC4Q8NCT1 418 aa14□□□□□ -0.17
RTF1-201ENST00000389629 RBPJLQ9UBG7 517 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms