RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ZIM2Q9NZV7 527 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 CLEC1BQ9P126 229 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 CKAP5Q14008 2032 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SLC28A1O00337 649 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 PLK4O00444 970 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 ANGPT2O15123 496 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 CLDN9O95484 217 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 ANPEPP15144 967 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 VHLP40337 213 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 P2RY2P41231 377 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SESN3P58005 492 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 ABRAXAS2Q15018 415 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SMU1Q2TAY7 513 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 BCL7AQ4VC05 210 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 RAET1GQ6H3X3 334 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 P2RY13Q9BPV8 354 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 HEBP1Q9NRV9 189 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 CDH23Q9H251 3354 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 SLC5A10A0PJK1 596 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 LOC730098B7Z3J9 87 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 TRIM38O00635 465 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 NPC1O15118 1278 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 RGS14O43566 566 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 PSIP1O75475 530 aaKnown RBP24.62■■□□□ 1.53
SHOX2-201ENST00000389589 MAP4P27816 1152 aaKnown RBP24.62■■□□□ 1.53
SHOX2-201ENST00000389589 ICE2Q659A1 982 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 C8orf82Q6P1X6 216 aaPredicted RBP24.62■■□□□ 1.53
SHOX2-201ENST00000389589 ADGRG6Q86SQ4 1221 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 SLC26A7Q8TE54 656 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 FBXL8Q96CD0 374 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 SPAG4Q9NPE6 437 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 ADA2Q9NZK5 511 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 STON1Q9Y6Q2 735 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 LSM1O15116 133 aaKnown RBP24.62■■□□□ 1.53
SHOX2-201ENST00000389589 ULK1O75385 1050 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 SLC22A3O75751 556 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 ENPP2Q13822 863 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 NR6A1Q15406 480 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 LRRC74BQ6ZQY2 392 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 RNF11Q9Y3C5 154 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 FADS3Q9Y5Q0 445 aa24.62■■□□□ 1.53
SHOX2-201ENST00000389589 TMEM202A6NGA9 273 aa24.61■■□□□ 1.53
SHOX2-201ENST00000389589 KCNK10P57789 538 aa24.61■■□□□ 1.53
SHOX2-201ENST00000389589 CNTN1Q12860 1018 aa24.61■■□□□ 1.53
SHOX2-201ENST00000389589 GGTA1PQ4G0N0 100 aa24.61■■□□□ 1.53
SHOX2-201ENST00000389589 ZNF514Q96K75 400 aaPredicted RBP24.61■■□□□ 1.53
SHOX2-201ENST00000389589 MAGEB10Q96LZ2 347 aaPredicted RBP24.61■■□□□ 1.53
SHOX2-201ENST00000389589 ACTR8Q9H981 624 aa24.61■■□□□ 1.53
SHOX2-201ENST00000389589 RANBP2P49792 3224 aaKnown RBP24.61■■□□□ 1.53
SHOX2-201ENST00000389589 MTHFRP42898 656 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 PTCHD3Q3KNS1 767 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 PRMT9Q6P2P2 845 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 TRIM46Q7Z4K8 759 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 SLC22A15Q8IZD6 547 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 ATL1Q8WXF7 558 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 HOPXQ9BPY8 73 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-201ENST00000389589 C1orf50Q9BV19 199 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 TRIM39Q9HCM9 518 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 GID8Q9NWU2 228 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 KLQ9UEF7 1012 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 PACSIN3Q9UKS6 424 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 E7ENX8 843 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 ARNTLO00327 626 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 MANBAO00462 879 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 RNASEH1O60930 286 aaKnown RBP24.6■■□□□ 1.53
SHOX2-201ENST00000389589 KRT6AP02538 564 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 CATP04040 527 aaKnown RBP24.6■■□□□ 1.53
SHOX2-201ENST00000389589 KRT6BP04259 564 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 XRCC1P18887 633 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-201ENST00000389589 CAPN3P20807 821 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 KRT6CP48668 564 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 ERFP50548 548 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 CCR3P51677 355 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 MAD2L1Q13257 205 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-201ENST00000389589 GTF2H3Q13889 308 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 RCAN2Q14206 197 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 FLOT2Q14254 428 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 AP5B1Q2VPB7 878 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 VPS26BQ4G0F5 336 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 PIP5KL1Q5T9C9 394 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 MTSS1LQ765P7 747 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 KBTBD6Q86V97 674 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 SPDL1Q96EA4 605 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 FOPNLQ96NB1 174 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 ZDHHC4Q9NPG8 344 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 DNAJC11Q9NVH1 559 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 CCL27Q9Y4X3 112 aa24.6■■□□□ 1.53
SHOX2-201ENST00000389589 A0A1W2PP18 115 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 K7ESM1 405 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 LIN7AO14910 233 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-201ENST00000389589 EPORP19235 508 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 TNFRSF4P43489 277 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 ABRQ12979 859 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 RETREG3Q86VR2 466 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 CHPFQ8IZ52 775 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 PPFIBP2Q8ND30 876 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 USP7Q93009 1102 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 RSPH9Q9H1X1 276 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-201ENST00000389589 SLC52A3Q9NQ40 469 aa24.59■■□□□ 1.53
SHOX2-201ENST00000389589 SUCOQ9UBS9 1254 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms