RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 SDR39U1Q9NRG7 319 aaPredicted RBP0.19□□□□□ -2.38
RNU6-880P-201ENST00000384526 MIOSQ9NXC5 875 aa0.19□□□□□ -2.38
RNU6-880P-201ENST00000384526 OR14J1Q9UGF5 321 aa0.19□□□□□ -2.38
RNU6-880P-201ENST00000384526 FAM50BQ9Y247 325 aa0.19□□□□□ -2.38
RNU6-880P-201ENST00000384526 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.19□□□□□ -2.38
RNU6-880P-201ENST00000384526 ANKHD1Q8IWZ3 2542 aaKnown RBP0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 VWA3AA6NCI4 1184 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 PEX12O00623 359 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 VTNP04004 478 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 MYL3P08590 195 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 TNFAIP3P21580 790 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 HRH2P25021 359 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 PTPN3P26045 913 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 GIFP27352 417 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 AXLP30530 894 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 WNT4P56705 351 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 IRX4P78413 519 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 PDE1CQ14123 709 aaPredicted RBP0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 EFTUD2Q15029 972 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 ALG11Q2TAA5 492 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 AGBL2Q5U5Z8 902 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 TMEM81Q6P7N7 255 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 LCLAT1Q6UWP7 414 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 TMEM207Q6UWW9 146 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 ZNF589Q86UQ0 364 aaPredicted RBP0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 RNF130Q86XS8 419 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 RASGEF1CQ8N431 466 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 EMC1Q8N766 993 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 C11orf65Q8NCR3 313 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 OR6Y1Q8NGX8 325 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 AFAP1L1Q8TED9 768 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 RNF138Q8WVD3 245 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 NSMAFQ92636 917 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 UBAC1Q9BSL1 405 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 HOXD1Q9GZZ0 328 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 THAP2Q9H0W7 228 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 SIL1Q9H173 461 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 SLC28A3Q9HAS3 691 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 SUFUQ9UMX1 484 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 B3GALT5Q9Y2C3 310 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 SCINQ9Y6U3 715 aa0.18□□□□□ -2.38
RNU6-880P-201ENST00000384526 A0A1W2PRB8 838 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 ANP32CO43423 234 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 GJB3O75712 270 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 VENTXO95231 258 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 HOXB5P09067 269 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 NR2C1P13056 603 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 CST5P28325 142 aaPredicted RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 PDIA3P30101 505 aaKnown RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 PPOXP50336 477 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 EFNB1P98172 346 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 CDC16Q13042 620 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 NR1D2Q14995 579 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 PFKFB4Q16877 469 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 LONRF1Q17RB8 773 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 C9orf129Q5T035 196 aaKnown RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 MARC1Q5VT66 337 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 AGAP7PQ5VUJ5 663 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 TANGO2Q6ICL3 276 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 CHMP1BQ7LBR1 199 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 PCYOX1LQ8NBM8 494 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 OR4Q3Q8NH05 313 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 ZCRB1Q8TBF4 217 aaKnown RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 SGF29Q96ES7 293 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 RRNAD1Q96FB5 475 aaKnown RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 SIPA1Q96FS4 1042 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 CD180Q99467 661 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 ZNF670Q9BS34 389 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 KIFC3Q9BVG8 833 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 MYNNQ9NPC7 610 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 ALKBH4Q9NXW9 302 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 RCC2Q9P258 522 aaKnown RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 RAB26Q9ULW5 256 aa0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 ZFP37Q9Y6Q3 630 aaPredicted RBP0.17□□□□□ -2.38
RNU6-880P-201ENST00000384526 CEACAM4O75871 244 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 IGHV4-31P0DP07 118 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 ANPEPP15144 967 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 ACHEP22303 614 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 ELK3P41970 407 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 GABRB2P47870 512 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 UBE4AQ14139 1066 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 SQLEQ14534 574 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 CTXN3Q4LDR2 81 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 LEMD1Q68G75 181 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 ZNF544Q6NX49 715 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 GGT6Q6P531 493 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 NOTUMQ6P988 496 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 ARHGAP12Q8IWW6 846 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 MYO1HQ8N1T3 1032 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 C4orf32Q8N8J7 132 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 USP38Q8NB14 1042 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 OR1L3Q8NH93 324 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 RUFY2Q8WXA3 655 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 FRAT1Q92837 279 aaPredicted RBP0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 DHX58Q96C10 678 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 GPATCH3Q96I76 525 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 GFI1Q99684 422 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 MAPKAP1Q9BPZ7 522 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 DEFB126Q9BYW3 111 aa0.16□□□□□ -2.38
RNU6-880P-201ENST00000384526 IKZF5Q9H5V7 419 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms