RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 TIFAQ96CG3 184 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 GPR63Q9BZJ6 419 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 PLGRKTQ9HBL7 147 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 GMEB1Q9Y692 573 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 XIRP2A4UGR9 3374 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 GAPDHSO14556 408 aaPredicted RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 RAD51BO15315 384 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 S100BP04271 92 aaPredicted RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 PPM1AP35813 382 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 MTHFRP42898 656 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 GDF5P43026 501 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 PIK3CGP48736 1102 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CHRNB3Q05901 458 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 NKG7Q16617 165 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 FGD3Q5JSP0 725 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 PTRHD1Q6GMV3 140 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 SLC13A3Q8WWT9 602 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 PPP3R2Q96LZ3 170 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CCDC115Q96NT0 180 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 IKZF5Q9H5V7 419 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 ZNHIT2Q9UHR6 403 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 FCF1Q9Y324 198 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 TRIM64BA6NI03 449 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 SOX1O00570 391 aaPredicted RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 SCAMP3O14828 347 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 MAGEB3O15480 346 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 KCNH1O95259 989 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CPNE6O95741 557 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 GLUD1P00367 558 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 SOD2P04179 222 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 THRBP10828 461 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 ERVFC1P60507 584 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CAMK1Q14012 370 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 ENPP6Q6UWR7 440 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CERS6Q6ZMG9 384 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 CLDN19Q8N6F1 224 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 PDZD8Q8NEN9 1154 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 OR2T12Q8NG77 320 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 FNDC8Q8TC99 324 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 LZICQ8WZA0 190 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 FIG4Q92562 907 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 GORASP2Q9H8Y8 452 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 FARSBQ9NSD9 589 aaKnown RBP13.58□□□□□ -0.24
NEK4-202ENST00000383721 PRSS21Q9Y6M0 314 aa13.58□□□□□ -0.24
NEK4-202ENST00000383721 C5orf67F2Z3F1 127 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 FFAR3O14843 346 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 GPR42O15529 346 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 CD247P20963 164 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 IST1P53990 364 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 TMED1Q13445 227 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 CBX2Q14781 532 aaPredicted RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 PHKG1Q16816 387 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 ZNF773Q6PK81 442 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 CROCCP3Q8IVE0 287 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 MSRB3Q8IXL7 192 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 CLEC4FQ8N1N0 589 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 ZNF548Q8NEK5 533 aaPredicted RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 CLPBQ9H078 707 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 RHBDL2Q9NX52 303 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 PRAMEF1O95521 474 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 IRS1P35568 1242 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 RHOAP61586 193 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 C16orf72Q14CZ0 275 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 FAM174BQ3ZCQ3 159 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
NEK4-202ENST00000383721 KIAA1841Q6NSI8 718 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 OR13F1Q8NGS4 319 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 OR10A6Q8NH74 314 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 FBXO30Q8TB52 745 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 OVCA2Q8WZ82 227 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 SLC25A37Q9NYZ2 338 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 UTS2RQ9UKP6 389 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 MYO9BQ13459 2157 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
NEK4-202ENST00000383721 SH3PXD2BA1X283 911 aa13.56□□□□□ -0.24
NEK4-202ENST00000383721 C2orf78A6NCI8 922 aa13.56□□□□□ -0.24
NEK4-202ENST00000383721 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
NEK4-202ENST00000383721 MSH3P20585 1137 aa13.56□□□□□ -0.24
NEK4-202ENST00000383721 MATN1P21941 496 aa13.56□□□□□ -0.24
NEK4-202ENST00000383721 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms