RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 AXIN1O15169 862 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 RPL10P27635 214 aaKnown RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 MAPK9P45984 424 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 YPEL5P62699 121 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 CDKL1Q00532 357 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 GALNT1Q10472 559 aaPredicted RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 RPA4Q13156 261 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 RBBP7Q16576 425 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 FAM219BQ5XKK7 198 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 TSACCQ96A04 125 aaPredicted RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 SCARF2Q96GP6 870 aaPredicted RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 CD244Q9BZW8 370 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 ZBTB26Q9HCK0 441 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 MID1IP1Q9NPA3 183 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 DLGAP2Q9P1A6 1054 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 A0A1W2PPC4 97 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 AP1S2P56377 157 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 SH3BP2P78314 561 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 LCP2Q13094 533 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 VWA5B1Q5TIE3 1220 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 UHRF1Q96T88 793 aaPredicted RBP26.17■■□□□ 1.78
MSX1-201ENST00000382723 TIMM29Q9BSF4 260 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 SLCO1B1Q9Y6L6 691 aa26.17■■□□□ 1.78
MSX1-201ENST00000382723 C1orf105O95561 183 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 RABIFP47224 123 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 RPL6Q02878 288 aaKnown RBP26.16■■□□□ 1.78
MSX1-201ENST00000382723 DMWDQ09019 674 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 TCEA2Q15560 299 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 CDKL4Q5MAI5 379 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 ABI3BPQ7Z7G0 1075 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 PDZD3Q86UT5 571 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 TEX9Q8N6V9 391 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 EDAQ92838 391 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 PPP1R36Q96LQ0 422 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 EBF4Q9BQW3 602 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 SPATA6Q9NWH7 488 aaPredicted RBP26.16■■□□□ 1.78
MSX1-201ENST00000382723 KLQ9UEF7 1012 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 KLHL33A6NCF5 533 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 ZNF195O14628 629 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 ACADLP28330 430 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 IFT88Q13099 833 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 GOLGA7Q7Z5G4 137 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 SPACA7Q96KW9 195 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 OR2M4Q96R27 311 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 SIKE1Q9BRV8 207 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 IER2Q9BTL4 223 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 ZDHHC5Q9C0B5 715 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 WWP1Q9H0M0 922 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 OPTCQ9UBM4 332 aa26.16■■□□□ 1.78
MSX1-201ENST00000382723 A0A1B0GTL3 188 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 MATN2O00339 956 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 NUDT1P36639 197 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 CLCNKAP51800 687 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 NAA20P61599 178 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 DMPKQ09013 629 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 GTF2H2Q13888 395 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 CLEC6AQ6EIG7 209 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 GTF2H2CQ6P1K8 395 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 TSSK4Q6SA08 328 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 UBTD2Q8WUN7 234 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 SLC6A18Q96N87 628 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 PLCD4Q9BRC7 762 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 ORAI3Q9BRQ5 295 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 NOL11Q9H8H0 719 aaKnown RBP26.15■■□□□ 1.78
MSX1-201ENST00000382723 AASDHPPTQ9NRN7 309 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 PNMA8BQ9ULN7 279 aaPredicted RBP26.15■■□□□ 1.78
MSX1-201ENST00000382723 ASF1AQ9Y294 204 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 TRAF6Q9Y4K3 522 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 ANGPTL3Q9Y5C1 460 aa26.15■■□□□ 1.78
MSX1-201ENST00000382723 CFAP20Q9Y6A4 193 aaKnown RBP26.15■■□□□ 1.78
MSX1-201ENST00000382723 METTL12A8MUP2 240 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 DIAPH2O60879 1101 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 STK16O75716 305 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 MLYCDO95822 493 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 SLC35G4P0C7Q5 338 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 HNMTP50135 292 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 PDCD2Q16342 344 aaPredicted RBP26.14■■□□□ 1.78
MSX1-201ENST00000382723 ZXDCQ2QGD7 858 aaPredicted RBP26.14■■□□□ 1.78
MSX1-201ENST00000382723 USP39Q53GS9 565 aaKnown RBP26.14■■□□□ 1.78
MSX1-201ENST00000382723 SLC22A18ASQ8N1D0 253 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 TCAIMQ8N3R3 496 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 PHC3Q8NDX5 983 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 MAPK15Q8TD08 544 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 AGAP11Q8TF27 550 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 RILPQ96NA2 401 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 PKP4Q99569 1192 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 ACSL5Q9ULC5 683 aa26.14■■□□□ 1.78
MSX1-201ENST00000382723 HDAC3O15379 428 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 MAP3K13O43283 966 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 ALOX15P16050 662 aaPredicted RBP26.14■■□□□ 1.77
MSX1-201ENST00000382723 PRDX3P30048 256 aaKnown RBP26.14■■□□□ 1.77
MSX1-201ENST00000382723 ARL1P40616 181 aaPredicted RBP26.14■■□□□ 1.77
MSX1-201ENST00000382723 IDH3AP50213 366 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 TFGQ92734 400 aaPredicted RBP26.14■■□□□ 1.77
MSX1-201ENST00000382723 PYCR2Q96C36 320 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 CCDC138Q96M89 665 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 NUF2Q9BZD4 464 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 ATG10Q9H0Y0 220 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 HEY2Q9UBP5 337 aa26.14■■□□□ 1.77
MSX1-201ENST00000382723 ANKRD12Q6UB98 2062 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms