RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 S100PP25815 95 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 MAT2AP31153 395 aaKnown RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 CNTN2Q02246 1040 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 DUSP4Q13115 394 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 KLF10Q13118 480 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 RBM48Q5RL73 367 aaKnown RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 CRELD2Q6UXH1 353 aaPredicted RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 ZYG11AQ6WRX3 759 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SNX29P2Q8IUI4 249 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 ZDHHC21Q8IVQ6 265 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 YIPF7Q8N8F6 280 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PHC3Q8NDX5 983 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 OR7D4Q8NG98 312 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 TIFAQ96CG3 184 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 MIOSQ9NXC5 875 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 CALML5Q9NZT1 146 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 HMGXB4Q9UGU5 601 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PCDHGB7Q9Y5F8 929 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SLITRK3O94933 977 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 ALPPP05187 535 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 ASGR1P07306 291 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SLC6A4P31645 630 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 CASRP41180 1078 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 LAPTM5Q13571 262 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PRPF38BQ5VTL8 546 aaKnown RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 ZDHHC20Q5W0Z9 365 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 GPR153Q6NV75 609 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SPATC1Q76KD6 591 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 RIOX2Q8IUF8 465 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 CREG2Q8IUH2 290 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SLC9A9Q8IVB4 645 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 OR5M3Q8NGP4 307 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 TRPM4Q8TD43 1214 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 THEM6Q8WUY1 208 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 DPYSL5Q9BPU6 564 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 OR10A4Q9H209 315 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 AGO3Q9H9G7 860 aaKnown RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 C1orf109Q9NX04 203 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 EVLQ9UI08 416 aaPredicted RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 EDARQ9UNE0 448 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 TMX2Q9Y320 296 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 TCRBV9S1A1TA0A576 114 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PCDHGA12O60330 932 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PAGE1O75459 146 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 PLA2G16P53816 162 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 TAS2R50P59544 299 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 MRPS6P82932 125 aaKnown RBP5.78□□□□□ -1.48
RFX3-204ENST00000382004 BNIP3Q12983 259 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 GRIK2Q13002 908 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 EIPR1Q53HC9 387 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 GPR139Q6DWJ6 353 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 HID1Q8IV36 788 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 OR5T1Q8NG75 326 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SHC3Q92529 594 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 SSX3Q99909 188 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 IPPKQ9H8X2 491 aa5.78□□□□□ -1.48
RFX3-204ENST00000382004 KHNYNO15037 678 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 IL33O95760 270 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 HOXB6P17509 224 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 RPIAP49247 311 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 NR0B1P51843 470 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 ATXN7L3Q14CW9 347 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 PCBP2Q15366 365 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■■■■□ 25.8
RFX3-204ENST00000382004 ATAD3CQ5T2N8 411 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 KLHL36Q8N4N3 616 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KLHL6Q8WZ60 621 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KCNC2Q96PR1 638 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MKKSQ9NPJ1 570 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 SERINC1Q9NRX5 453 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF510Q9Y2H8 683 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PCDHB1Q9Y5F3 818 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 E9PAM4 449 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TRAFD1O14545 582 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 ATP5A1P25705 553 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 GNRHRP30968 328 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KHKP50053 298 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC5A3P53794 718 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC26A5P58743 744 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SSTP61278 116 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TIGD6Q17RP2 521 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 LINGO4Q6UY18 593 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 OTOP1Q7RTM1 612 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 OTOP3Q7RTS5 596 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KLK6Q92876 244 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PFDN5Q99471 154 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 GPR21Q99679 349 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TM9SF2Q99805 663 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ERVK-7P63135 1459 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SALL1Q9NSC2 1324 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 A0A1W2PQH9 124 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SHOX2O60902 331 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 STK16O75716 305 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 LGALS2P05162 132 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RAB4AP20338 218 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SPAM1P38567 509 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ILF3Q12906 894 aaKnown RBP eCLIP5.77□□□□□ -1.497e-7■□□□□ 10
RFX3-204ENST00000382004 CLCA4Q14CN2 919 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SH3D19Q5HYK7 790 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 UBXN11Q5T124 520 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms