RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZNF667Q5HYK9 610 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 RTP2Q5QGT7 225 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MPP7Q5T2T1 576 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 EFCAB12Q6NXP0 572 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 BMP8AQ7Z5Y6 402 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SLC5A11Q8WWX8 675 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 REPS1Q96D71 796 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 RPL10LQ96L21 214 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ILKAPQ9H0C8 392 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 FAM83DQ9H4H8 585 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 LDAHQ9H6V9 325 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SLC17A6Q9P2U8 582 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MBD2Q9UBB5 411 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 DCDC2Q9UHG0 476 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TRHDEQ9UKU6 1024 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CDYLQ9Y232 598 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 A3GALT2U3KPV4 340 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CCL15-CCL14A0A0B4J2E2 113 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 E2F8A0AVK6 867 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MBLAC1A4D2B0 266 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PMS2P1A4D2B8 440 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 STX7O15400 261 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 LDOC1O95751 146 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GNRH1P01148 92 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 DNTTP04053 509 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ALPPP05187 535 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TCF3P15923 654 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ZP3P21754 424 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ETV6P41212 452 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MASP1P48740 699 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ARSFP54793 590 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 RPP38P78345 283 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CCL15Q16663 113 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 HADHQ16836 314 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TUSC1Q2TAM9 212 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF699Q32M78 642 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GLYATQ6IB77 296 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 FAM180BQ6P0A1 224 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF782Q6ZMW2 699 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 DPH6Q7L8W6 267 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 OR8H2Q8N162 312 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 OR6M1Q8NGM8 313 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TRNT1Q96Q11 434 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ACOX2Q99424 681 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TINF2Q9BSI4 451 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC32Q9BV29 185 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TMEM245Q9H330 911 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 A0A0A6YYJ9 748 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 DFFAO00273 331 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 XPNPEP2O43895 674 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SRP72O76094 671 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CNTN5O94779 1100 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 THRBP10828 461 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 BRCC3P46736 316 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 STX5Q13190 355 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MAMLD1Q13495 774 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TFDP2Q14188 446 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GRB7Q14451 532 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PDK2Q15119 407 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GRK1Q15835 563 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GRIK4Q16099 956 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ARMC4Q5T2S8 1044 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 KDELC1Q6UW63 502 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 GALNT10Q86SR1 603 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MPP5Q8N3R9 675 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 OR7G3Q8NG95 312 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 RACGAP1Q9H0H5 632 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PPIL3Q9H2H8 161 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TTYH1Q9H313 450 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ELOVL6Q9H5J4 265 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ACSL5Q9ULC5 683 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SLC22A7Q9Y694 548 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 THSD7BQ9C0I4 1608 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 A0A1W2PP18 115 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LACTBL1A8MY62 500 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LOC110117498-PIK3R3F6TDL0 507 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 NME4O00746 187 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CYP11A1P05108 521 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 ALPLP05186 524 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 MYL9P24844 172 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 PIGAP37287 484 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RPL14P50914 215 aaKnown RBP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CLCNKAP51800 687 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 AIF1P55008 147 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 KCNK10P57789 538 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CREMQ03060 361 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FADDQ13158 208 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 DUSP6Q16828 381 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LY6KQ17RY6 165 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 SPATS1Q496A3 300 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CYP27C1Q4G0S4 372 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LCN8Q6JVE9 175 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 TRILQ7L0X0 811 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC190Q86UF4 302 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 DEPDC1BQ8WUY9 529 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 COPS5Q92905 334 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms