RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 AKR7A2O43488 359 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 KLHL18O94889 574 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 ITGAVP06756 1048 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 DHRS4L1P0CG22 281 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 HPGDP15428 266 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 DNASE1P24855 282 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 GNPDA1P46926 289 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 SCNN1GP51170 649 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 PRKCDQ05655 676 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 RFTN1Q14699 578 aaPredicted RBP11.58□□□□□ -0.55
NPHP4-202ENST00000378161 FLYWCH1Q4VC44 716 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.55
NPHP4-202ENST00000378161 KDM1BQ8NB78 822 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 PPP1R13LQ8WUF5 828 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 CRB3Q9BUF7 120 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 SORBS1Q9BX66 1292 aaKnown RBP11.58□□□□□ -0.55
NPHP4-202ENST00000378161 FBXO5Q9UKT4 447 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 CLCA3PQ9Y6N3 262 aa11.58□□□□□ -0.55
NPHP4-202ENST00000378161 A0A1W2PPL8 197 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SLC28A1O00337 649 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PDCD5O14737 125 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 TO15178 435 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PSMD3O43242 534 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PGK1P00558 417 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SFTPCP11686 197 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 CHMP24386 653 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ADORA2AP29274 412 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MAP2K3P46734 347 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SULT1E1P49888 294 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 RBFAQ8N0V3 343 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 CERS5Q8N5B7 392 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 RXFP2Q8WXD0 754 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SCRN2Q96FV2 425 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PCDHGB2Q9Y5G2 931 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PLIN4Q96Q06 1357 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MN1Q10571 1320 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 hCG_1807616A0A1W2PRN6 198 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 L7N2F9 121 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PLIN3O60664 434 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 TIGD6Q17RP2 521 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 REP15Q6BDI9 236 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF613Q6PF04 617 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MPZL3Q6UWV2 235 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 FAM124AQ86V42 546 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 CHST13Q8NET6 341 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 GATAD2BQ8WXI9 593 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SLC38A4Q969I6 547 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 OR52B2Q96RD2 323 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 APOL2Q9BQE5 337 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 CCM2LQ9NUG4 571 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 DMAC2Q9NW81 257 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PCDHA2Q9Y5H9 948 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 LRIG2O94898 1065 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MT-CO1P00395 513 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 CST1P01037 141 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ADORA3P0DMS8 318 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SPNP16150 400 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF14P17017 642 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SYN1P17600 705 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 LBPP18428 481 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 C2orf80Q0P641 193 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 GOLGA7BQ2TAP0 167 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZACNQ401N2 412 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF680Q8NEM1 530 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 AP3S1Q92572 193 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 KAT2AQ92830 837 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 MUC13Q9H3R2 512 aa11.58□□□□□ -0.56
NPHP4-202ENST00000378161 RPH3AQ9Y2J0 694 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF487B1APH4 448 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 CAPN5O15484 640 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 BRINP1O60477 761 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 RNGTTO60942 597 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 STX11O75558 287 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 CPNE6O95741 557 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 TXNP10599 105 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 PTGER2P43116 358 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ALDH9A1P49189 494 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 NAGLUP54802 743 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 POU4F2Q12837 409 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 BAK1Q16611 211 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 DACT2Q5SW24 774 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF470Q6ECI4 717 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 CA5BP1Q8WTZ4 195 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 TANKQ92844 425 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ZFP42Q96MM3 310 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 C14orf105Q9NVL8 296 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 GFOD1Q9NXC2 390 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 SPHK1Q9NYA1 384 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 POLG2Q9UHN1 485 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms