RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 VITQ6UXI7 678 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 CENPNQ96H22 339 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 MCMBPQ9BTE3 642 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 CRISPLD1Q9H336 500 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 TFB2MQ9H5Q4 396 aaKnown RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 SMPD3Q9NY59 655 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF221Q9UK13 617 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 SLC31A1O15431 190 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 DNAJA2O60884 412 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 FESP07332 822 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 C2orf80Q0P641 193 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 DLG1Q12959 904 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UPP1Q16831 310 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PIM3Q86V86 326 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ARMC8Q8IUR7 673 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PIK3C3Q8NEB9 887 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PTGFRNQ9P2B2 879 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF222Q9UK12 451 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 LYVE1Q9Y5Y7 322 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 COLEC10Q9Y6Z7 277 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 CACNA1SQ13698 1873 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 LRRC72A6NJI9 287 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 LOC110117498-PIK3R3F6TDL0 507 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 SLC22A2O15244 555 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 SLC28A2O43868 658 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 MTRF1O75570 445 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 SLC10A3P09131 477 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 IMPDH1P20839 514 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 BUD31P41223 144 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 RPS9P46781 194 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 MS4A13Q5J8X5 152 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 CCDC36Q8IYA8 594 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 GALNT15Q8N3T1 639 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 OR2AP1Q8NGE2 309 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 PPP1R14AQ96A00 147 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 FCRL3Q96P31 734 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 TTLL2Q9BWV7 592 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 INTS7Q9NVH2 962 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 TRNAU1APQ9NX07 287 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 UGT2B11O75310 529 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 BEST1O76090 585 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 ABATP80404 500 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 SOX4Q06945 474 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 PLEKHG4Q58EX7 1191 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 LDLRAP1Q5SW96 308 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 PPP2R2DQ66LE6 453 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 TRIT1Q9H3H1 467 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 GIN1Q9NXP7 522 aa14.77□□□□□ -0.04
NPHP4-201ENST00000378156 SAMD4AQ9UPU9 718 aaKnown RBP14.77□□□□□ -0.04
NPHP4-201ENST00000378156 OR10H3O60404 316 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 GALTP07902 379 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 GMFBP60983 142 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 CBX3Q13185 183 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 NEK5Q6P3R8 708 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
NPHP4-201ENST00000378156 OR52L1Q8NGH7 329 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 MOCOSQ96EN8 888 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 MOV10Q9HCE1 1003 aaKnown RBP14.77□□□□□ -0.05
NPHP4-201ENST00000378156 POLR1DQ9Y2S0 133 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 PLK4O00444 970 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 EDN1P05305 212 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 AQP1P29972 269 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 PGGT1BP53609 377 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 CMTM8Q8IZV2 173 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 ENDOVQ8N8Q3 282 aaKnown RBP14.77□□□□□ -0.05
NPHP4-201ENST00000378156 OR9I1Q8NGQ6 314 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 FNDC11Q9BVV2 318 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 NUSAP1Q9BXS6 441 aaKnown RBP14.77□□□□□ -0.05
NPHP4-201ENST00000378156 SEMA3GQ9NS98 782 aa14.77□□□□□ -0.05
NPHP4-201ENST00000378156 NIPSNAP2O75323 286 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 GPIP06744 558 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 GNAZP19086 355 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 HERVK_113P63132 956 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 SPIBQ01892 262 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 CNPY1Q3B7I2 92 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 TMEM214Q6NUQ4 689 aaKnown RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 GDPD4Q6W3E5 623 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 PNPT1Q8TCS8 783 aaKnown RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 ZNF514Q96K75 400 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 ERVK-6Q9BXR3 956 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 TDP1Q9NUW8 608 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 GULP1Q9UBP9 304 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 PCDHGA11Q9Y5H2 935 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 TJP1Q07157 1748 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 IRGMA1A4Y4 181 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 E7ENX8 843 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 RASGRP1O95267 797 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 SOD2P04179 222 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 TUBA4AP68366 448 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 LAPTM5Q13571 262 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 RFTN2Q52LD8 501 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 RNF19BQ6ZMZ0 732 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 PRR23CQ6ZRP0 262 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 THAP5Q7Z6K1 395 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 GALNT5Q7Z7M9 940 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 RAB43Q86YS6 212 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 SMG8Q8ND04 991 aaKnown RBP14.76□□□□□ -0.05
NPHP4-201ENST00000378156 MIPEPQ99797 713 aa14.76□□□□□ -0.05
NPHP4-201ENST00000378156 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms