RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RADILQ96JH8 1075 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 TBC1D14Q9P2M4 693 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 FAM240BA0A1B0GVZ2 78 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 TOR1BO14657 336 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 EDNRAP25101 427 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ECM1Q16610 540 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 OR4E2Q8NGC2 313 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 NDC1Q9BTX1 674 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 SMCO3A2RU48 225 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 CYP1A2P05177 515 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ACTR1BP42025 376 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ACTR1AP61163 376 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 GXYLT1Q4G148 440 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 SMYD5Q6GMV2 418 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ZNF782Q6ZMW2 699 aaPredicted RBP16.08■□□□□ 0.16
RGP1-201ENST00000378078 ZNF548Q8NEK5 533 aaPredicted RBP16.08■□□□□ 0.16
RGP1-201ENST00000378078 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
RGP1-201ENST00000378078 PYCR2Q96C36 320 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 REM1O75628 298 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 KDM4BO94953 1096 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SDC2P34741 201 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 ADAM8P78325 824 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 E2F2Q14209 437 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC25A52Q3SY17 297 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 AAGABQ6PD74 315 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 OR10A6Q8NH74 314 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 MCFD2Q8NI22 146 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC39A3Q9BRY0 314 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 FADS2P1A8MWK0 482 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 OR4F21O95013 312 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 GPD2P43304 727 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 NRIP1P48552 1158 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 RPP38P78345 283 aaKnown RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 OR4K17Q8NGC6 315 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 OR8H1Q8NGG4 311 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 GIPC3Q8TF64 312 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 BSNDQ8WZ55 320 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 MED28Q9H204 178 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 CHST10O43529 356 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 PLATP00750 562 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 ALPPP05187 535 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 CD48P09326 243 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 CSTF2P33240 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
RGP1-201ENST00000378078 MPP2Q14168 576 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC9A4Q6AI14 798 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC25A25Q6KCM7 469 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 PAOXQ6QHF9 649 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 FKBPLQ9UIM3 349 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 hCG_1818297A0A087WSY0 165 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 C13orf42A0A1B0GVH6 325 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 PRR5-ARHGAP8B1AHC4 643 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 LCA5LO95447 670 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 HCKP08631 526 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 VARSP26640 1264 aaKnown RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 ARHGAP8P85298 464 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 PRR5P85299 388 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 TXNDC8Q6A555 127 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SH3YL1Q96HL8 342 aaPredicted RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 GLOD4Q9HC38 313 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 A6NCN8 305 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 TNFSF12O43508 249 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC3A1Q07837 685 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 LSM14AQ8ND56 463 aaKnown RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 TMEM161BQ8NDZ6 487 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 SLC35C1Q96A29 364 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 EBNA1BP2Q99848 306 aaKnown RBP16.07■□□□□ 0.16
RGP1-201ENST00000378078 COMMD3Q9UBI1 195 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 HIF3AQ9Y2N7 669 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 COMMD3-BMI1R4GMX3 469 aa16.07■□□□□ 0.16
RGP1-201ENST00000378078 TBX18O95935 607 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 BDKRB1P46663 353 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 RGS19P49795 217 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 RASGEF1BQ0VAM2 473 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 ABHD13Q7L211 337 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 FAM156AQ8NDB6 213 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 OR8S1Q8NH09 359 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 KLHL6Q8WZ60 621 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 SNX7Q9UNH6 387 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 PEX12O00623 359 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 RGS10O43665 173 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 NARSO43776 548 aaKnown RBP16.06■□□□□ 0.16
RGP1-201ENST00000378078 UGT2B11O75310 529 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 FMO1Q01740 532 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 CREB5Q02930 508 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 CPNE9Q8IYJ1 553 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 TMEM203Q969S6 136 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 C2CD2Q9Y426 696 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 TMEM150CB9EJG8 249 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 PSKH1P11801 424 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 NOMO3P69849 1222 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 NOMO1Q15155 1222 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 KANSL1Q7Z3B3 1105 aa16.06■□□□□ 0.16
RGP1-201ENST00000378078 TBC1D21Q8IYX1 336 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms