RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CFAP61Q8NHU2 1237 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 SLC37A2Q8TED4 501 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 ZDHHC1Q8WTX9 485 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 TFGQ92734 400 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-202ENST00000377342 KIAA1191Q96A73 305 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 PKNOX2Q96KN3 472 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 ALG9Q9H6U8 611 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 NMRAL1Q9HBL8 299 aa20.77■□□□□ 0.92
CBWD3-202ENST00000377342 SSU72Q9NP77 194 aaKnown RBP20.77■□□□□ 0.92
CBWD3-202ENST00000377342 IMP3Q9NV31 184 aaKnown RBP20.77■□□□□ 0.92
CBWD3-202ENST00000377342 PRAMEF33A0A0G2JMD5 474 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 HMGB1P1B2RPK0 211 aaPredicted RBP20.77■□□□□ 0.91
CBWD3-202ENST00000377342 TK2O00142 265 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 NOBOXO60393 691 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 LRP3O75074 770 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 ANXA6P08133 673 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 SBK3P0C264 359 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 HALP42357 657 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 KCNC1P48547 511 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 SP140Q13342 867 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 CSRP2Q16527 193 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 CCSMST1Q4G0I0 132 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 C16orf46Q6P387 395 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 SFRP1Q8N474 314 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 OR5AR1Q8NGP9 310 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 ALKBH8Q96BT7 664 aaKnown RBP20.77■□□□□ 0.91
CBWD3-202ENST00000377342 ATOH8Q96SQ7 321 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 TFB2MQ9H5Q4 396 aaKnown RBP20.77■□□□□ 0.91
CBWD3-202ENST00000377342 XPR1Q9UBH6 696 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 DCDC2Q9UHG0 476 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 DOLKQ9UPQ8 538 aa20.77■□□□□ 0.91
CBWD3-202ENST00000377342 RIF1Q5UIP0 2472 aaKnown RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 IFRD1O00458 451 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 PCDHGA12O60330 932 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 C1orf105O95561 183 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 C8GP07360 202 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 UBE2IP63279 158 aaKnown RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 MPP2Q14168 576 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 ACAP2Q15057 778 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 C6orf132Q5T0Z8 1188 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 N4BP2L1Q5TBK1 243 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 UBE2R2Q712K3 238 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 ADAMTSL2Q86TH1 951 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 C17orf82Q86X59 251 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 PHC3Q8NDX5 983 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 DNAAF2Q9NVR5 837 aaKnown RBP20.76■□□□□ 0.91
CBWD3-202ENST00000377342 ASF1AQ9Y294 204 aa20.76■□□□□ 0.91
CBWD3-202ENST00000377342 CDX4O14627 284 aaPredicted RBP20.75■□□□□ 0.91
CBWD3-202ENST00000377342 ZNF883P0CG24 379 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 SLC19A1P41440 591 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 NHLH1Q02575 133 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 KLC3Q6P597 504 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 KYQ8NBH2 561 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 OR5K2Q8NHB8 316 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 RHEBL1Q8TAI7 183 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 TSNARE1Q96NA8 513 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 SLC12A9Q9BXP2 914 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 MED4Q9NPJ6 270 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 NLGN3Q9NZ94 848 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 SIRPGQ9P1W8 387 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 SLC17A7Q9P2U7 560 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 RAPGEFL1Q9UHV5 662 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 PDE10AQ9Y233 779 aa20.75■□□□□ 0.91
CBWD3-202ENST00000377342 GVINP1Q7Z2Y8 2422 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 TRBV23OR9-2A0A075B6M9 112 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 KIR2DS5A0A0G2JLQ3 304 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 A0A0G2JNG1 304 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 NEMP2A6NFY4 417 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 TARM1B6A8C7 271 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 KIR2DS3K7RE56 304 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 TRIM38O00635 465 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 SLC16A5O15375 505 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 PRPF4O43172 522 aaKnown RBP eCLIP20.74■□□□□ 0.91
CBWD3-202ENST00000377342 KERAO60938 352 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 PROCP04070 461 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 RPA3P35244 121 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-202ENST00000377342 MAPK9P45984 424 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 CCT5P48643 541 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 ATXN3P54252 364 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-202ENST00000377342 MAZP56270 477 aaKnown RBP20.74■□□□□ 0.91
CBWD3-202ENST00000377342 GRB7Q14451 532 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 KIR2DS5Q14953 304 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 OGFOD3Q6PK18 319 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 TCP10LQ8TDR4 215 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 HGH1Q9BTY7 390 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 EDEM2Q9BV94 578 aa20.74■□□□□ 0.91
CBWD3-202ENST00000377342 PLIN3O60664 434 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 CATP04040 527 aaKnown RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 XRCC1P18887 633 aaPredicted RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 KPNA2P52292 529 aaKnown RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 MBOAT1Q6ZNC8 495 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 DCUN1D3Q8IWE4 304 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 FBXO15Q8NCQ5 510 aaPredicted RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 GPR156Q8NFN8 814 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 OR4C6Q8NH72 309 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 FOPNLQ96NB1 174 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 MRPL46Q9H2W6 279 aaKnown RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 UTP6Q9NYH9 597 aaKnown RBP20.73■□□□□ 0.91
CBWD3-202ENST00000377342 CIDEBQ9UHD4 219 aa20.73■□□□□ 0.91
CBWD3-202ENST00000377342 GRID1Q9ULK0 1009 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms