RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 UBOX5O94941 541 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 JUPP14923 745 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 ITPKBP27987 946 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 HMGCS1Q01581 520 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 CHRNB3Q05901 458 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 VAC14Q08AM6 782 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 FRG1Q14331 258 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 C16orf62Q7Z3J2 963 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SLC9B2Q86UD5 537 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 TCAIMQ8N3R3 496 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SRFBP1Q8NEF9 429 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 NR1H4Q96RI1 486 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SH3GL1Q99961 368 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 YY1AP1Q9H869 796 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 TEX264Q9Y6I9 313 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 ZNF860A6NHJ4 632 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 OR52A4PA6NMU1 304 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 EPN2O95208 641 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 GBAP04062 536 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SYPP08247 313 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 NR2F1P10589 423 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 COL6A2P12110 1019 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 CD68P34810 354 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 GMPRP36959 345 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 MRPS21P82921 87 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 OC90Q02509 493 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 GPAT3Q53EU6 434 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 ACSBG2Q5FVE4 666 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 POMZP3Q6PJE2 187 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 AGTRAPQ6RW13 159 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 HSD11B1LQ7Z5J1 315 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 MREGQ8N565 214 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 KYQ8NBH2 561 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 OR2A12Q8NGT7 310 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 MAPK15Q8TD08 544 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 XAGE5Q8WWM1 108 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SMPDL3AQ92484 453 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 SLC9A6Q92581 669 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 FCRL3Q96P31 734 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 OR52E6Q96RD3 313 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 LRTM1Q9HBL6 345 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 IL26Q9NPH9 171 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 ITM2CQ9NQX7 267 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 NLE1Q9NVX2 485 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 CROTQ9UKG9 612 aa8.3□□□□□ -1.08
CRNKL1-202ENST00000377340 PRRT4C9JH25 899 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 KLK3P07288 261 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CD6P30203 668 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CRHR1P34998 444 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CAPZA2P47755 286 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CCR3P51677 355 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 TRIP10Q15642 601 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 IL23RQ5VWK5 629 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 TTC29Q8NA56 475 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 OR2T34Q8NGX1 318 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 KIFC1Q9BW19 673 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 PRSS16Q9NQE7 514 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 NUDT4Q9NZJ9 180 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 OR6C74A6NCV1 312 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 A8MUI8 341 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 B4GALT2O60909 372 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ECI2O75521 394 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 PDE5AO76074 875 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 PROCP04070 461 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 TNFRSF8P28908 595 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 AQP1P29972 269 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 GPX6P59796 221 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 LCP2Q13094 533 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ANKRD46Q86W74 232 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ZFP28Q8NHY6 868 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 HM13Q8TCT9 377 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 BTN2A2Q8WVV5 523 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ZNF689Q96CS4 500 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 NAF1Q96HR8 494 aaKnown RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CDRT15Q96T59 188 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 SYT11Q9BT88 431 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 RBCK1Q9BYM8 510 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 IL21Q9HBE4 155 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 RDH14Q9HBH5 336 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ZDHHC18Q9NUE0 388 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CORO1CQ9ULV4 474 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 SCN1AP35498 2009 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 KIAA1217Q5T5P2 1943 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 K7EPI3 171 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 SLC28A1O00337 649 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 LIN7AO14910 233 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 NDUFS4O43181 175 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 CACNG3O60359 315 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 UMPSP11172 480 aa8.29□□□□□ -1.08
CRNKL1-202ENST00000377340 ATP6V1B2P21281 511 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms