RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PRDM8Q9NQV8 689 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 IMP3Q9NV31 184 aaKnown RBP11.45□□□□□ -0.58
DDR1-227ENST00000376570 C5AR2Q9P296 337 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 RSL24D1Q9UHA3 163 aaKnown RBP11.45□□□□□ -0.58
DDR1-227ENST00000376570 MAP4K5Q9Y4K4 846 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 SPTBP11277 2137 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 IFRD1O00458 451 aaPredicted RBP11.45□□□□□ -0.58
DDR1-227ENST00000376570 SOCS2O14508 198 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 SNAP29O95721 258 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 EPCAMP16422 314 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 SELPLGQ14242 412 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 GAREM2Q75VX8 874 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 RAVER1Q8IY67 606 aaKnown RBP11.45□□□□□ -0.58
DDR1-227ENST00000376570 NDUFA13Q9P0J0 144 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 TSC22D4Q9Y3Q8 395 aa11.45□□□□□ -0.58
DDR1-227ENST00000376570 ZNF195O14628 629 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ERAL1O75616 437 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 PRKD3O94806 890 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 KCNH1O95259 989 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ASLP04424 464 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PCCBP05166 539 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 UBE3AQ05086 875 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 FAM98BQ52LJ0 330 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 CHSY3Q70JA7 882 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 CLEC14AQ86T13 490 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ZDHHC13Q8IUH4 622 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PSD4Q8NDX1 1056 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 OR2AP1Q8NGE2 309 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 POF1BQ8WVV4 589 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 KIAA1191Q96A73 305 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 C1orf74Q96LT6 269 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 NSMCE3Q96MG7 304 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 YIPF4Q9BSR8 244 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 OR51B5Q9H339 312 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PCDHGA7Q9Y5G6 932 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 GLOD5A6NK44 160 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ZNF487B1APH4 448 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 GPC1P35052 558 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 GNPDA1P46926 289 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ENTPD1P49961 510 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ARHGDIAP52565 204 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 NR1H2P55055 460 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 NFATC2Q13469 925 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 GPRC6AQ5T6X5 926 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 ZNF555Q8NEP9 628 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PLEKHG4BQ96PX9 1271 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 NRTNQ99748 197 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 OSBPL6Q9BZF3 934 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 TUBB1Q9H4B7 451 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 FAM124BQ9H5Z6 455 aaPredicted RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 PRDM16Q9HAZ2 1276 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 SELENONQ9NZV5 590 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 FAM155AB1AL88 458 aaPredicted RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 KDM1AO60341 852 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 EIF2S1P05198 315 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 UROSP10746 265 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 PABPC1P11940 636 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 RGL4Q8IZJ4 473 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 DRAXINQ8NBI3 349 aaPredicted RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 DDHD1Q8NEL9 900 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 CD200R1Q8TD46 325 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 CDK5RAP1Q96SZ6 601 aaKnown RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 NANOGQ9H9S0 305 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 SGK2Q9HBY8 427 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 UBAP1Q9NZ09 502 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 CXXC1Q9P0U4 656 aaPredicted RBP11.44□□□□□ -0.58
DDR1-227ENST00000376570 ZNF229Q9UJW7 825 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 SQORQ9Y6N5 450 aa11.44□□□□□ -0.58
DDR1-227ENST00000376570 RTCAO00442 366 aaKnown RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 NME6O75414 186 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 SOD2P04179 222 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 ELK4P28324 431 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 PTGER3P43115 390 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 HK2P52789 917 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 INHBCP55103 352 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 CAMK2GQ13555 558 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 GRIN2CQ14957 1233 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 SFRP1Q8N474 314 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 TCF12Q99081 682 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 EQTNQ9NQ60 294 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 MIEF1Q9NQG6 463 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 NLE1Q9NVX2 485 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 RSL1D1O76021 490 aaKnown RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 FDXRP22570 491 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 VARSP26640 1264 aaKnown RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 CA5AP35218 305 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 PRKCQQ04759 706 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 AASDHQ4L235 1098 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 MPPE1Q53F39 396 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 PIGGQ5H8A4 983 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 PSRC1Q6PGN9 363 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 PATL1Q86TB9 770 aaKnown RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 GPR180Q86V85 440 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 TMCO5AQ8N6Q1 288 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms