RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 H3BM21 787 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 HGSO14964 777 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 LATO43561 262 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 THRAP10827 490 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ACADMP11310 421 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 NCF1P14598 390 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 TARSP26639 723 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 OXTRP30559 389 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ERVPABLB-1P60509 514 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PDCD2Q16342 344 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 GSTA3Q16772 222 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 METRNLQ641Q3 311 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 RPS27LQ71UM5 84 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 GALNT13Q8IUC8 556 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 BEND7Q8N7W2 519 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 OR56A3Q8NH54 315 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 OR14C36Q8NHC7 312 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 FAM174AQ8TBP5 190 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 EGFL8Q99944 293 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 TUBB1Q9H4B7 451 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 NOL11Q9H8H0 719 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 IPPKQ9H8X2 491 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ACSS2Q9NR19 701 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 MBNL1Q9NR56 388 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 PPP6CO00743 305 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 CBX6O95503 412 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 C1orf105O95561 183 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 HGFP14210 728 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 GABRG2P18507 467 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 NDUFV2P19404 249 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 MAP4P27816 1152 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 HSD17B2P37059 387 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 CASP2P42575 452 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 INPP5AQ14642 412 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 RBBP7Q16576 425 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PRPF38BQ5VTL8 546 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 TRIM46Q7Z4K8 759 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PDZD3Q86UT5 571 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 AMZ2Q86W34 360 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 TSPEARQ8WU66 669 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 SHDQ96IW2 340 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 RTKNQ9BST9 563 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 SHCBP1LQ9BZQ2 653 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 HS3ST3A1Q9Y663 406 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 CDH23Q9H251 3354 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 LRRC72A6NJI9 287 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ARHGEF33A8MVX0 844 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PCCBP05166 539 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ASGR2P07307 311 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ERGP11308 486 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 FOSL2P15408 326 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PRPH2P23942 346 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 HSPA7P48741 367 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 CCNG1P51959 295 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 DNAL1Q4LDG9 190 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 C10orf62Q5T681 223 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 IER5LQ5T953 404 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 CLEC6AQ6EIG7 209 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ADHFE1Q8IWW8 467 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 TEX9Q8N6V9 391 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 PHC3Q8NDX5 983 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 OSBPL6Q9BZF3 934 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 RIC8BQ9NVN3 520 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 ASIC5Q9NY37 505 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 UTP6Q9NYH9 597 aaKnown RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 ARMCX1Q9P291 453 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 E9PBE3 544 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 TNFRSF10CO14798 259 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 UBDO15205 165 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 KLHL41O60662 606 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 RASSF9O75901 435 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 APBB3O95704 486 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 RPN2P04844 631 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 ACPPP15309 386 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 EPORP19235 508 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 NCF2P19878 526 aaPredicted RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 IGFALSP35858 605 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 TPMTP51580 245 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 FOXA1P55317 472 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 YPEL5P62699 121 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 RIPK1Q13546 671 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 ARHGAP19Q14CB8 494 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 MAPRE2Q15555 327 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 ZXDCQ2QGD7 858 aaPredicted RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 LIPJQ5W064 366 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 LETMD1Q6P1Q0 360 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 TRAPPC5Q8IUR0 188 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 OR4F6Q8NGB9 312 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 AGR3Q8TD06 166 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 NAT14Q8WUY8 206 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 USP7Q93009 1102 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 WDR34Q96EX3 536 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 APOOQ9BUR5 198 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms