RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 UBIAD1Q9Y5Z9 338 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 PIP5K1BO14986 540 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 POU2F1P14859 743 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 XKP51811 444 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 HGSNATQ68CP4 663 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 AMIGO1Q86WK6 493 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 OXR1Q8N573 874 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 LRRC57Q8N9N7 239 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 DPAGT1Q9H3H5 408 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 RUVBL1Q9Y265 456 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 MRPS23Q9Y3D9 190 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 I3L521 148 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 ADH1AP07327 375 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 NT5EP21589 574 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 CRYBB1P53674 252 aaPredicted RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 NAE1Q13564 534 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 RHEBQ15382 184 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 DRICH1Q6PGQ1 229 aaPredicted RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 THAP6Q8TBB0 222 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 CREB3L1Q96BA8 519 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 KREMEN1Q96MU8 473 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 TRPV4Q9HBA0 871 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 OR6C75A6NL08 312 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 PDPK1O15530 556 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 CPNE3O75131 537 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 LGR5O75473 907 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 ITGB1P05556 798 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 PTPRAP18433 802 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 VLDLRP98155 873 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 DAG1Q14118 895 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 VMACQ2NL98 169 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 TOMM5Q8N4H5 51 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 IRGQQ8WZA9 623 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 SPATA9Q9BWV2 254 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 POLR2J3Q9H1A7 115 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 DNAAF2Q9NVR5 837 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 TMEM9Q9P0T7 183 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 SCAMP3O14828 347 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 ITGA10O75578 1167 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 GNAZP19086 355 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 FMO3P31513 532 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 SMAD3P84022 425 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 C10orf82Q8WW14 230 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 C12orf43Q96C57 262 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 IFT27Q9BW83 186 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 MSCO60682 206 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 C1RP00736 705 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 ZNF823P16415 610 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 AP1S1P61966 158 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 HERVK_113P63132 956 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 ERVK-8P63133 956 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 MADCAM1Q13477 382 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 GXYLT1Q4G148 440 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 PAOXQ6QHF9 649 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 HDDC3Q8N4P3 179 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 ERVK-6Q9BXR3 956 aa9.68□□□□□ -0.86
SPEN-201ENST00000375759 METTL8Q9H825 291 aaKnown RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 PHPT1Q9NRX4 125 aaPredicted RBP9.68□□□□□ -0.86
SPEN-201ENST00000375759 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 H0YJX3 145 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 EI24O14681 340 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 NUP54Q7Z3B4 507 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 DENND6BQ8NEG7 585 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 SPEF2Q9C093 1822 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 L7N2F9 121 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 SPATA31C1P0DKV0 1188 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 VAMP2P63027 116 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 SYCE2Q6PIF2 218 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 GPR135Q8IZ08 494 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 NUDT15Q9NV35 164 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 LYARQ9NX58 379 aaKnown RBP9.67□□□□□ -0.86
SPEN-201ENST00000375759 POFUT2Q9Y2G5 429 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 PCDHGA11Q9Y5H2 935 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 ATRNO75882 1429 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 ARHGAP23Q9P227 1491 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 CCRL2O00421 344 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 NADK2Q4G0N4 442 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 OTOP3Q7RTS5 596 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 TMEM139Q8IV31 216 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 LINC00471Q8N535 108 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 UBXN7O94888 489 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 CMPK1P30085 196 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 SLC18A1P54219 525 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 YBEYP58557 167 aaPredicted RBP9.67□□□□□ -0.86
SPEN-201ENST00000375759 HSPB3Q12988 150 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 NPTX1Q15818 432 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 ZNF572Q7Z3I7 529 aaPredicted RBP9.67□□□□□ -0.86
SPEN-201ENST00000375759 TUBA1CQ9BQE3 449 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 OR51V1Q9H2C8 321 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 TNS2Q63HR2 1409 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 A0A1B0GVC2 190 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 GSTT2P0CG29 244 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 RHOQP17081 205 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 PVALBP20472 110 aaPredicted RBP9.67□□□□□ -0.86
SPEN-201ENST00000375759 TPRG1LQ5T0D9 272 aa9.67□□□□□ -0.86
SPEN-201ENST00000375759 KIAA1324Q6UXG2 1013 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms