RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 DNASE1L1P49184 302 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 MSL3Q8N5Y2 521 aaKnown RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 LMX1AQ8TE12 382 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 ELAC1Q9H777 363 aaKnown RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 LOC110117498-PIK3R3F6TDL0 507 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 YBEYP58557 167 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 RIPK1Q13546 671 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 LAPTM5Q13571 262 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 TAB1Q15750 504 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 OR4E2Q8NGC2 313 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 CHMP1AQ9HD42 196 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 BRD7Q9NPI1 651 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 BBIP1A8MTZ0 92 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 TRAFD1O14545 582 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 UGT2B11O75310 529 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 KLK1P06870 262 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 ARFIP1P53367 373 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 GPR68Q15743 365 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 RNF121Q9H920 327 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 PCDHGB3Q9Y5G1 929 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 RGS21Q2M5E4 152 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 DCAF12L1Q5VU92 463 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 HOMEZQ8IX15 550 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 KBTBD7Q8WVZ9 684 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 FADS3Q9Y5Q0 445 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 NADKO95544 446 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 HTRA3P83110 453 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SFRP1Q8N474 314 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 FAM192AQ9GZU8 254 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 UNC93B1Q9H1C4 597 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SUV39H2Q9H5I1 410 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 KCNK6Q9Y257 313 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SNUPNO95149 360 aaKnown RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 UNGP13051 313 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 IL7RP16871 459 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 GDF5P43026 501 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SLC11A1P49279 550 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TAS2R39P59534 338 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SLC35G5Q96KT7 338 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 CBLP22681 906 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 CEBPGP53567 150 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TRIM74Q86UV6 250 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 PQLC1Q8N2U9 271 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 EIF1ADQ8N9N8 165 aaKnown RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 WWP2O00308 870 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 PDPK1O15530 556 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 PRODHO43272 600 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 OPN1SWP03999 348 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 GGT5P36269 586 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 SMU1Q2TAY7 513 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TMEM198Q66K66 360 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TMEM214Q6NUQ4 689 aaKnown RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 FAM46DQ8NEK8 389 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 OR10H4Q8NGA5 316 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 DSN1Q9H410 356 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 ADAP2Q9NPF8 381 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 TAC3Q9UHF0 121 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 PRPF19Q9UMS4 504 aaKnown RBP16.86■□□□□ 0.29
MCF2L-203ENST00000375604 WASF2Q9Y6W5 498 aa16.86■□□□□ 0.29
MCF2L-203ENST00000375604 WNT9AO14904 365 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 FMO3P31513 532 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 AP1S1P61966 158 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 OGFOD2Q6N063 350 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 FEM1AQ9BSK4 669 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 RBCK1Q9BYM8 510 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 C3P01024 1663 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 UBE2QL1A1L167 161 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TYRP1P17643 537 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 GPD2P43304 727 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 CLCNKAP51800 687 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 CBX3Q13185 183 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 SLBPQ14493 270 aaKnown RBP eCLIP16.85■□□□□ 0.29
MCF2L-203ENST00000375604 FITM2Q8N6M3 262 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 CHID1Q9BWS9 393 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 PCDHAC1Q9H158 963 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 PGRMC2O15173 223 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 PCDHGA12O60330 932 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 RGS20O76081 388 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 IL12AP29459 219 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 DENND5AQ6IQ26 1287 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 KCTD8Q6ZWB6 473 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TVP23BQ9NYZ1 205 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TMEM63AO94886 807 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 NSG1P42857 185 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 OC90Q02509 493 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TLR1Q15399 786 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 AMER2Q8N7J2 671 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 SETD7Q8WTS6 366 aaKnown RBP16.85■□□□□ 0.29
MCF2L-203ENST00000375604 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 HAT1O14929 419 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 NME6O75414 186 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TGDSO95455 350 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms