RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MIPEPQ99797 713 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 FBXL21Q9UKT6 434 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 IL3P08700 152 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF182P17025 639 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 DET1Q7L5Y6 550 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 GID4Q8IVV7 300 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 DERL2Q9GZP9 239 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 IPPKQ9H8X2 491 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 KELP23276 732 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 HTR1EP28566 365 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SPAM1P38567 509 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 POU4F2Q12837 409 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM174Q8WUU8 243 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SPATA17Q96L03 361 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SLC2A11Q9BYW1 496 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 UCKL1Q9NWZ5 548 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 OAS3Q9Y6K5 1087 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 GADD45GO95257 159 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF3P17036 446 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CSTF2P33240 577 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM53Q6P2H8 277 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF614Q8N883 585 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 OMDQ99983 421 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 LGR4Q9BXB1 951 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 TRAPPC13A5PLN9 417 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SCGNO76038 276 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MC4RP32245 332 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SIM2Q14190 667 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 GAS6Q14393 721 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PNCKQ6P2M8 343 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PGAP1Q75T13 922 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 UBQLNLQ8IYU4 475 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PARP8Q8N3A8 854 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PYURFQ96I23 114 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 PPM1MQ96MI6 270 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 VRK1Q99986 396 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 TCF25Q9BQ70 676 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 C7orf50Q9BRJ6 194 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 NT5DC2Q9H857 520 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MEAF6Q9HAF1 191 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SIAEQ9HAT2 523 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 EVA1BQ9NVM1 165 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF806P0C7X5 589 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 UGT2B10P36537 528 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CRYBB1P53674 252 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MAZP56270 477 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MRPS10P82664 201 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 RASGEF1BQ0VAM2 473 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 TUBB3Q13509 450 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MED27Q6P2C8 311 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 NPNTQ6UXI9 565 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF567Q8N184 647 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SNX33Q8WV41 574 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 EDEM1Q92611 657 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 KAT2AQ92830 837 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SLC7A6OSQ96CW6 309 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 METTL2AQ96IZ6 378 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 EXOC2Q96KP1 924 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CYP2S1Q96SQ9 504 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 RPF2Q9H7B2 306 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SIX2Q9NPC8 291 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ZDHHC4Q9NPG8 344 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 NKX1-2Q9UD57 310 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 NOBOXO60393 691 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 OXSR1O95747 527 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CHRNA1P02708 482 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 HSD3B1P14060 373 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 HSD17B1P14061 328 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 AKR1A1P14550 325 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 HSD3B2P26439 372 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 FCGRTP55899 365 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 RALGDSQ12967 914 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 FN3KQ9H479 309 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 COL20A1Q9P218 1284 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SCP2D1Q9UJQ7 156 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 DCDC1P59894 354 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SLC25A25Q6KCM7 469 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 APOBEC3HQ6NTF7 200 aaKnown RBP10.02□□□□□ -0.81
PTCH1-204ENST00000375290 KBTBD6Q86V97 674 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 LGI2Q8N0V4 545 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 GALNT6Q8NCL4 622 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 CXorf40BQ96DE9 158 aa10.02□□□□□ -0.81
PTCH1-204ENST00000375290 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 XKRYO14609 159 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 USP12O75317 370 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ATP6AP2O75787 350 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 VARSP26640 1264 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RPL4P36578 427 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RPIAP49247 311 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TSPYL5Q86VY4 417 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 SLC44A3Q8N4M1 653 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms