RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ITPRIPL1Q6GPH6 555 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 DENND5AQ6IQ26 1287 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 AMIGO1Q86WK6 493 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 RAB43Q86YS6 212 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 KRT35Q92764 455 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 SNRNP40Q96DI7 357 aaKnown RBP13.35□□□□□ -0.27
CXCL12-202ENST00000374426 TCTN2Q96GX1 697 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 HGH1Q9BTY7 390 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 SLC7A5P2Q9GIP4 190 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 MVB12BQ9H7P6 319 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 FAM60AQ9NP50 221 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 ACTR10Q9NZ32 417 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 ERRFI1Q9UJM3 462 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-202ENST00000374426 PADI2Q9Y2J8 665 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 C2orf74A8MZ97 194 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 MAP3K7O43318 606 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 HCRTR1O43613 425 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 CLDN1O95832 211 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 HBQ1P09105 142 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 CBSLP0DN79 551 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 AGXTP21549 392 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 COL8A1P27658 744 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 CBSP35520 551 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 PRKG2Q13237 762 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 BOP1Q14137 746 aaKnown RBP13.34□□□□□ -0.27
CXCL12-202ENST00000374426 NR6A1Q15406 480 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ZIC1Q15915 447 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 KYNUQ16719 465 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 SARM1Q6SZW1 724 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 SPESP1Q6UW49 350 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 MAMDC2Q7Z304 686 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-202ENST00000374426 TRIM73Q86UV7 250 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 IQCKQ8N0W5 287 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 HEXDCQ8WVB3 486 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 C19orf43Q9BQ61 176 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ASF1BQ9NVP2 202 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
CXCL12-202ENST00000374426 AAR2Q9Y312 384 aaKnown RBP13.34□□□□□ -0.27
CXCL12-202ENST00000374426 TEP1Q99973 2627 aaKnown RBP13.34□□□□□ -0.27
CXCL12-202ENST00000374426 TRBV5-4A0A0C4DH59 114 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 LDB2O43679 373 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 CBX6O95503 412 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 LDLRP01130 860 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 TPM1P09493 284 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 PRSS56P0CW18 603 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 ACRV1P26436 265 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 MC4RP32245 332 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 HADHAP40939 763 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 GABRA4P48169 554 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 OTUD4Q01804 1114 aaKnown RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 RPA4Q13156 261 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 SSPNQ14714 243 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 DEFB110Q30KQ9 67 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 GPR33Q49SQ1 333 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 DCAF10Q5QP82 559 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 C1orf189Q5VU69 101 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 MLIPQ5VWP3 458 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 ZNF787Q6DD87 383 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 SERPINA9Q86WD7 417 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 GPR135Q8IZ08 494 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 CLDN19Q8N6F1 224 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 TFGQ92734 400 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 DNAJC1Q96KC8 554 aaKnown RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 IP6K3Q96PC2 410 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 GBP5Q96PP8 586 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 SPRTNQ9H040 489 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-202ENST00000374426 VPS37BQ9H9H4 285 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 ARNT2Q9HBZ2 717 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 ICKQ9UPZ9 632 aa13.33□□□□□ -0.28
CXCL12-202ENST00000374426 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 MASP2O00187 686 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
CXCL12-202ENST00000374426 OR2B3O76000 313 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CTSBP07858 339 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 UGT2B7P16662 529 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 DCTP40126 519 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 FOXL2P58012 376 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 SPARCL1Q14515 664 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 PRPSAP1Q14558 356 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 MYBPC3Q14896 1274 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CRB2Q5IJ48 1285 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 C11orf63Q6NUN7 778 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 UNC5AQ6ZN44 842 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms