RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SNAPINO95295 136 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SERPINE1P05121 402 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SLC2A3P11169 496 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF3P17036 446 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NFKB1P19838 968 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NME2P22392 152 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 MAOBP27338 520 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TYK2P29597 1187 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 IL12RB1P42701 662 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 RPIAP49247 311 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 HOXA1P49639 335 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TPMTP51580 245 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NKX3-2P78367 333 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GAD2Q05329 585 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 FAPQ12884 760 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ZMYND11Q15326 602 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 FAM110CQ1W6H9 321 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ANKRD22Q5VYY1 191 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TMEM81Q6P7N7 255 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 UNC5DQ6UXZ4 953 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 CATSPER4Q7RTX7 472 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PAGE2Q7Z2X7 111 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ACOT1Q86TX2 421 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 KIF18BQ86Y91 864 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NLGN4XQ8N0W4 816 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 FAM71DQ8N9W8 422 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GLB1L3Q8NCI6 653 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 FAM156AQ8NDB6 213 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TEX47Q8TBZ9 253 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 DEDD2Q8WXF8 326 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PTP4A1Q93096 173 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PPWD1Q96BP3 646 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 BIRC7Q96CA5 298 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PARK7Q99497 189 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PTPN18Q99952 460 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 RC3H2Q9HBD1 1191 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 POLR3BQ9NW08 1133 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SMPD3Q9NY59 655 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TAS2R9Q9NYW1 312 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 CCDC59Q9P031 241 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 HES2Q9Y543 173 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NME7Q9Y5B8 376 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GMPPBQ9Y5P6 360 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PLXNB2O15031 1838 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 AGAP5A6NIR3 686 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 H0YAE9 185 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 AP3D1O14617 1153 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SSX5O60225 188 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PRPSAP2O60256 369 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SNX4O95219 450 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ALBP02768 609 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 JMJD7P0C870 316 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SMIM10L2AP0DMW4 78 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SMIM10L2BP0DMW5 78 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TIMP2P16035 220 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GARSP41250 739 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 DGKGP49619 791 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GP2P55259 537 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 CDH6P55285 790 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PURAQ00577 322 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ART3Q13508 389 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 DPYSL3Q14195 570 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GRM3Q14832 879 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 STARD3Q14849 445 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GPAT3Q53EU6 434 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ZC3H12BQ5HYM0 836 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 LGSNQ5TDP6 509 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 RETSATQ6NUM9 610 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NOTUMQ6P988 496 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ALKAL1Q6UXT8 129 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 LRRC52Q8N7C0 313 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 PPM1NQ8N819 430 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 OR8K5Q8NH50 307 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SPATA18Q8TC71 538 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 MCOLN3Q8TDD5 553 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SLC35F5Q8WV83 523 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SLC7A6Q92536 515 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SMG7Q92540 1137 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 UFD1Q92890 307 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 C18orf25Q96B23 403 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 ZHX1-C8orf76Q96EF9 292 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
ATG4A-203ENST00000372232 SRRDQ9UH36 339 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NDOR1Q9UHB4 597 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 CYB5R1Q9UHQ9 305 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 AP4E1Q9UPM8 1137 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 DTX4Q9Y2E6 619 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 MBLAC1A4D2B0 266 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SLC15A5A6NIM6 579 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 F8W036 122 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TRIM24O15164 1050 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 AXIN1O15169 862 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 B4GAT1O43505 415 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 WDPCPO95876 746 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 C1QAP02745 245 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 DARSP14868 501 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms