RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HDAC3O15379 428 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 MLYCDO95822 493 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 KELP23276 732 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 BDKRB1P46663 353 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 HNMTP50135 292 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 CWF19L1Q69YN2 538 aaKnown RBP23.31■■□□□ 1.32
SNX3-203ENST00000368979 CHST15Q7LFX5 561 aaPredicted RBP23.31■■□□□ 1.32
SNX3-203ENST00000368979 PDZD3Q86UT5 571 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 UHRF1Q96T88 793 aaPredicted RBP23.31■■□□□ 1.32
SNX3-203ENST00000368979 EBF4Q9BQW3 602 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 ORAI3Q9BRQ5 295 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 MID1IP1Q9NPA3 183 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 DLGAP2Q9P1A6 1054 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 A0A1W2PPC4 97 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 K7ESF4 209 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 KCNJ13O60928 360 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 C1orf105O95561 183 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 ACP5P13686 325 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 MAP4P27816 1152 aaKnown RBP23.3■■□□□ 1.32
SNX3-203ENST00000368979 CXCL12P48061 93 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 IDH3AP50213 366 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 IFT88Q13099 833 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 ZXDCQ2QGD7 858 aaPredicted RBP23.3■■□□□ 1.32
SNX3-203ENST00000368979 TTC23LQ6PF05 361 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 EPGNQ6UW88 154 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 TRPM8Q7Z2W7 1104 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 GOLGA7Q7Z5G4 137 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNX3-203ENST00000368979 MAPK15Q8TD08 544 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 FBXL8Q96CD0 374 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 FAR2Q96K12 515 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 HGH1Q9BTY7 390 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 ZDHHC5Q9C0B5 715 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 ABCF3Q9NUQ8 709 aa23.3■■□□□ 1.32
SNX3-203ENST00000368979 DCTN3O75935 186 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 FGF4P08620 206 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 HTR1BP28222 390 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 MAGEA9P43362 315 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 SIGLEC14Q08ET2 396 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 GTF2H2Q13888 395 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 VWA5B1Q5TIE3 1220 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 GTF2H2CQ6P1K8 395 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 ENPP7Q6UWV6 458 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 UNC5DQ6UXZ4 953 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 MAMSTRQ6ZN01 415 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 STON2Q8WXE9 905 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 OR1E3Q8WZA6 343 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 ZNF382Q96SR6 550 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 PCED1AQ9H1Q7 454 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 KLC4Q9NSK0 619 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 MOSPD1Q9UJG1 213 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 TRAF6Q9Y4K3 522 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 PLXND1Q9Y4D7 1925 aa23.29■■□□□ 1.32
SNX3-203ENST00000368979 ZFC3H1O60293 1989 aaKnown RBP23.29■■□□□ 1.32
SNX3-203ENST00000368979 A0A1B0GTL3 188 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 KRT87PA6NCN2 255 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CCT8L1PA6NM43 557 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 K7EPI3 171 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 TNFRSF10CO14798 259 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CCNT2O60583 730 aaKnown RBP23.28■■□□□ 1.32
SNX3-203ENST00000368979 GNPDA1P46926 289 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 RABIFP47224 123 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 SLC6A12P48065 614 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 TUBB3Q13509 450 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CCSMST1Q4G0I0 132 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 AFAP1L2Q8N4X5 818 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 SPDYE1Q8NFV5 336 aaPredicted RBP23.28■■□□□ 1.32
SNX3-203ENST00000368979 SKA1Q96BD8 255 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 PDXPQ96GD0 296 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CCDC138Q96M89 665 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 OR2M4Q96R27 311 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 OPTCQ9UBM4 332 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 HEY2Q9UBP5 337 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 ZNF225Q9UK10 706 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 ACSL5Q9ULC5 683 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 STK16O75716 305 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 ESRRBO95718 433 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 GDF5P43026 501 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 RBBP7Q16576 425 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 KANK2Q63ZY3 851 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 Q6ZSR6 202 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 LRRC70Q7Z2Q7 622 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 SYVN1Q86TM6 617 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CLYBLQ8N0X4 340 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 FITM2Q8N6M3 262 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 TEX9Q8N6V9 391 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 OR13H1Q8NG92 308 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 NECAB3Q96P71 396 aaPredicted RBP23.28■■□□□ 1.32
SNX3-203ENST00000368979 PKP4Q99569 1192 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 CARS2Q9HA77 564 aaKnown RBP23.28■■□□□ 1.32
SNX3-203ENST00000368979 GPR27Q9NS67 375 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 STK38LQ9Y2H1 464 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 GPSM3Q9Y4H4 160 aa23.28■■□□□ 1.32
SNX3-203ENST00000368979 OR7A17O14581 309 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 NDUFS2O75306 463 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 PDGFBP01127 241 aaPredicted RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 JUNP05412 331 aaKnown RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 SERPINB3P29508 390 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 PRDX3P30048 256 aaKnown RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 THOP1P52888 689 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms