RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 POLR2EP19388 210 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.39e-8■■■■□ 22
GOPC-202ENST00000368498 NR4A2P43354 598 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PSEN2P49810 448 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 TUBA3EQ6PEY2 450 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 AMIGO1Q86WK6 493 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PHC3Q8NDX5 983 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 TBX5Q99593 518 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 WACQ9BTA9 647 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 B4GAT1O43505 415 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 FAM189A1O60320 539 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 HCN1O60741 890 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 TBL1XO60907 577 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 FCER2P06734 321 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 CDKL1Q00532 357 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 BIKQ13323 160 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PTPRCAPQ14761 206 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 UBE2UQ5VVX9 321 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 ARMC6Q6NXE6 501 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PNPLA1Q8N8W4 532 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PSD4Q8NDX1 1056 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 LGALS12Q96DT0 336 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 KCTD3Q9Y597 815 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PCDHB3Q9Y5E6 796 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 MYO9BQ13459 2157 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 NT5C1B-RDH14C9J2C7 533 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 NRP1O14786 923 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PER2O15055 1255 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 SEPT4O43236 478 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 ASB12Q8WXK4 309 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 SMG7Q92540 1137 aaKnown RBP13.2□□□□□ -0.3
GOPC-202ENST00000368498 PPP1R14AQ96A00 147 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 CLIP3Q96DZ5 547 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 FBXL18Q96ME1 805 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
GOPC-202ENST00000368498 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 PMM2O15305 246 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
GOPC-202ENST00000368498 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
GOPC-202ENST00000368498 GNG2P59768 71 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 LILRA4P59901 499 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 NCS1P62166 190 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 SPANXN4Q5MJ08 99 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 SCAMP5Q8TAC9 235 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 FCGR1BQ92637 280 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 GPR20Q99678 358 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 MAT2BQ9NZL9 334 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 RIMKLBQ9ULI2 386 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 POLR1DQ9Y2S0 133 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 ASB3Q9Y575 518 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 M0QX08 132 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 CCNB2O95067 398 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 TFAP2AP05549 437 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 HUNKP57058 714 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 TAF10Q12962 218 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 TARDBPQ13148 414 aaKnown RBP eCLIP13.19□□□□□ -0.3
GOPC-202ENST00000368498 UAP1L1Q3KQV9 507 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 LGI4Q8N135 537 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 POMGNT2Q8NAT1 580 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 SLC37A3Q8NCC5 494 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 CLEC4DQ8WXI8 215 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 CLIC1O00299 241 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 CDRT1O95170 752 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 GLDCP23378 1020 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.34e-8■■■□□ 16.5
GOPC-202ENST00000368498 GLUD2P49448 558 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
GOPC-202ENST00000368498 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 TNFAIP8L2Q6P589 184 aaPredicted RBP13.19□□□□□ -0.3
GOPC-202ENST00000368498 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 TRUB1Q8WWH5 349 aaKnown RBP13.19□□□□□ -0.3
GOPC-202ENST00000368498 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
GOPC-202ENST00000368498 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms