RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CLCNKAP51800 687 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 NXPH1P58417 271 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 ABRQ12979 859 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 PCLAFQ15004 111 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 SBSNQ6UWP8 590 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 UBE2R2Q712K3 238 aaPredicted RBP20.16■□□□□ 0.82
SHISA4-201ENST00000362011 SPATS2Q86XZ4 545 aaKnown RBP20.16■□□□□ 0.82
SHISA4-201ENST00000362011 GPSM1Q86YR5 675 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 TMEM168Q9H0V1 697 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 OR52A5Q9H2C5 316 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 TMCO1Q9UM00 188 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 OARD1Q9Y530 152 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 LAMA1P25391 3075 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 WDR91A4D1P6 747 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 PRR19A6NJB7 356 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 G3V2L1 256 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 MATN4O95460 622 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 SLC35G4P0C7Q5 338 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 NEFHP12036 1026 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 CYP2A7P20853 494 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 ATP5F1P24539 256 aaPredicted RBP20.15■□□□□ 0.82
SHISA4-201ENST00000362011 ALDH3A1P30838 453 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 CSNK1EP49674 416 aaKnown RBP20.15■□□□□ 0.82
SHISA4-201ENST00000362011 CTBSQ01459 385 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 TCEAL6Q6IPX3 200 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 PDZD3Q86UT5 571 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 CFAP61Q8NHU2 1237 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 SREK1Q8WXA9 508 aaKnown RBP20.15■□□□□ 0.82
SHISA4-201ENST00000362011 ASB11Q8WXH4 323 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 TCEAL3Q969E4 200 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 MECRQ9BV79 373 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 WWP1Q9H0M0 922 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 DNAJC28Q9NX36 388 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 NUDT4Q9NZJ9 180 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 PILRBQ9UKJ0 227 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 ADAMTS6Q9UKP5 1117 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 WASF3Q9UPY6 502 aa20.15■□□□□ 0.82
SHISA4-201ENST00000362011 CACNA1EQ15878 2313 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 PABPN1LA6NDY0 278 aaKnown RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 GFYI3L273 518 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 UBXN8O00124 270 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 PSIP1O75475 530 aaKnown RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 CATP04040 527 aaKnown RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 S100BP04271 92 aaPredicted RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 ENO2P09104 434 aaPredicted RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 TPBGLP0DKB5 382 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 CTSEP14091 401 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 JUNDP17535 347 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 KCNA4P22459 653 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 DPP6P42658 865 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 KCNC1P48547 511 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 GUCY1A3Q02108 690 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 ILF3Q12906 894 aaKnown RBP eCLIP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 PPP1R3AQ16821 1122 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 ZNF542PQ5EBM4 170 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 RASGRP3Q8IV61 690 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 NUDCD3Q8IVD9 361 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 CCDC126Q96EE4 140 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 SLC12A9Q9BXP2 914 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 GSDMCQ9BYG8 508 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 TRIM54Q9BYV2 358 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 RDH14Q9HBH5 336 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 APOBEC3BQ9UH17 382 aaKnown RBP20.14■□□□□ 0.81
SHISA4-201ENST00000362011 PSMD13Q9UNM6 376 aa20.14■□□□□ 0.81
SHISA4-201ENST00000362011 IFRD1O00458 451 aaPredicted RBP20.13■□□□□ 0.81
SHISA4-201ENST00000362011 DLX3O60479 287 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 PROS1P07225 676 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 NME1P15531 152 aaKnown RBP20.13■□□□□ 0.81
SHISA4-201ENST00000362011 AK4P27144 223 aaPredicted RBP20.13■□□□□ 0.81
SHISA4-201ENST00000362011 ACADLP28330 430 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 ACTR1BP42025 376 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 ACTR1AP61163 376 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 ASPHQ12797 758 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 TGFBIQ15582 683 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 PEAR1Q5VY43 1037 aaPredicted RBP20.13■□□□□ 0.81
SHISA4-201ENST00000362011 UNC5DQ6UXZ4 953 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 SYT12Q8IV01 421 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 SLC22A9Q8IVM8 553 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 C10orf107Q8IVU9 208 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 TRIM42Q8IWZ5 723 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 CKAP2Q8WWK9 683 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 PIGKQ92643 395 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 RMDN2Q96LZ7 410 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 EDEM2Q9BV94 578 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 TCEAL2Q9H3H9 227 aaPredicted RBP20.13■□□□□ 0.81
SHISA4-201ENST00000362011 PARVBQ9HBI1 364 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 CD274Q9NZQ7 290 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 KLF15Q9UIH9 416 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 ST14Q9Y5Y6 855 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 FRYQ5TBA9 3013 aa20.13■□□□□ 0.81
SHISA4-201ENST00000362011 A0A1B0GVT2 93 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 NEMP2A6NFY4 417 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 A8MT66 165 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PDZK1P1A8MUH7 402 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 SNX2O60749 519 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 CSF2P04141 144 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 HIST1H2AGP0C0S8 130 aaPredicted RBP20.12■□□□□ 0.81
SHISA4-201ENST00000362011 MTHFD2P13995 350 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 GFAPP14136 432 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 HIST1H2ADP20671 130 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms