RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TAS2R42Q7RTR8 314 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 OR7G1Q8NGA0 311 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 C8orf48Q96LL4 319 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 ATOH8Q96SQ7 321 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 C17orf80Q9BSJ5 609 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 C1QTNF3Q9BXJ4 246 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 WDCPQ9H6R7 721 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 PCDH12Q9NPG4 1184 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 CCDC177Q9NQR7 707 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-201ENST00000361909 ABCB10Q9NRK6 738 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 HCSTQ9UBK5 93 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 BTRCQ9Y297 605 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 PCDHB5Q9Y5E4 795 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 ANKRD36A6QL64 1941 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 AGAP5A6NIR3 686 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 TNFRSF10BO14763 440 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 KERAO60938 352 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 KCNK2O95069 426 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 S1PR4O95977 384 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 OR4Q2P0C623 313 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 CSF2RAP15509 400 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 IL1RNP18510 177 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 MSH3P20585 1137 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 UFM1P61960 85 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 ANKS6Q68DC2 871 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 FCGR1BQ92637 280 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 HTRA1Q92743 480 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 LGALS12Q96DT0 336 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 ZHX1-C8orf76Q96EF9 292 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 SLC47A1Q96FL8 570 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 CELF6Q96J87 481 aaKnown RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 TTPALQ9BTX7 342 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 MAGED1Q9Y5V3 778 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 KIAA0100Q14667 2235 aaKnown RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 FGF10O15520 208 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 SCELO95171 688 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 MLYCDO95822 493 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 MTHFD2P13995 350 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 CASP2P42575 452 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 SERPINH1P50454 418 aaKnown RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 PRKCDQ05655 676 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 SLC13A2Q13183 592 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 PWP1Q13610 501 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 PFKFB4Q16877 469 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 CATSPEREQ5SY80 951 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 SPESP1Q6UW49 350 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 DLEU7Q6UYE1 221 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 C2orf15Q8WU43 125 aaKnown RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 TEX37Q96LM6 180 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 KCNA7Q96RP8 456 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 ATP13A1Q9HD20 1204 aa18.69■□□□□ 0.58
CMTM3-201ENST00000361909 PRDM5Q9NQX1 630 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-201ENST00000361909 NT5C1B-RDH14C9J2C7 533 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 DFFAO00273 331 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 HS6ST1O60243 411 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 PMPCBO75439 489 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 SNX4O95219 450 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 SIX3O95343 332 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 RPS17P08708 135 aaKnown RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 RABGGTBP53611 331 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TRAF3Q13114 568 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 GPR17Q13304 367 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 NPTX1Q15818 432 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 STEAP3Q658P3 488 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 IPCEF1Q8WWN9 437 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 EXT2Q93063 718 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TP53INP1Q96A56 240 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TKTL2Q9H0I9 626 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 GABARAPL1Q9H0R8 117 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ACTR8Q9H981 624 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 HEBP1Q9NRV9 189 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ABI2Q9NYB9 513 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF221Q9UK13 617 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 USP22Q9UPT9 525 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 COL4A6Q14031 1691 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 METTL15A6NJ78 407 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 STX16O14662 325 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 GSTA4O15217 222 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 MAFKO60675 156 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 PCNAP12004 261 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF37AP17032 561 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 PSMB9P28065 219 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 NR4A2P43354 598 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 CHRNA4P43681 627 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 COPZ1P61923 177 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 NCS1P62166 190 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 IL5RAQ01344 420 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ATP6AP1LQ52LC2 224 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 AGAP6Q5VW22 663 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 RSBN1Q5VWQ0 802 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 CAPN13Q6MZZ7 669 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF544Q6NX49 715 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-201ENST00000361909 ARHGAP12Q8IWW6 846 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 CLIP4Q8N3C7 705 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 PEX13Q92968 403 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 TBC1D20Q96BZ9 403 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 AGAP4Q96P64 663 aa18.68■□□□□ 0.58
CMTM3-201ENST00000361909 RC3H2Q9HBD1 1191 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms