RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ROPN1Q9HAT0 212 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 GPAMQ9HCL2 828 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 APOBEC2Q9Y235 224 aaKnown RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 HMX2A2RU54 273 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CPED1A4D0V7 1026 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 POC1B-GALNT4F8VUJ3 575 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 GFYI3L273 518 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CDH16O75309 829 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 PSIP1O75475 530 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 FAM155BO75949 473 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 WISP3O95389 354 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 TSPAN12O95859 305 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 C8GP07360 202 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 SERPINB8P50452 374 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CSRP3P50461 194 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 GPR18Q14330 331 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CYHR1Q6ZMK1 362 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 TIFABQ6ZNK6 161 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 SPRED1Q7Z699 444 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 PIM3Q86V86 326 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 SFTPA2Q8IWL1 248 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 MYO1HQ8N1T3 1032 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 RIBC1Q8N443 379 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 UHMK1Q8TAS1 419 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 EEF1AKMT1Q8WVE0 214 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 SKA2Q8WVK7 121 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 RAD51AP1Q96B01 352 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 UBXN10Q96LJ8 280 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 RAB11FIP5Q9BXF6 653 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-201ENST00000361439 TRBV23OR9-2A0A075B6M9 112 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 A0A087X1B8 175 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 MATN2O00339 956 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ZBTB14O43829 449 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 C1orf105O95561 183 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 CATP04040 527 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ENO2P09104 434 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 SAT1P21673 171 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 GCAP28676 217 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 HSD17B2P37059 387 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 MAGEA12P43365 314 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ABRQ12979 859 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 CROCCP2Q86T23 111 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 RASGRP3Q8IV61 690 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 RAB42Q8N4Z0 105 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 OR10G6Q8NH81 332 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 MRRFQ96E11 262 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 DERL2Q9GZP9 239 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 RAB33BQ9H082 229 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 KCNK4Q9NYG8 393 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 TLK1Q9UKI8 766 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 ACOT9Q9Y305 439 aa13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-201ENST00000361439 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ZNF839A8K0R7 811 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 DUX1O43812 170 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 UBXN7O94888 489 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 SHBGP04278 402 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 MPOP05164 745 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 MAP4P27816 1152 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 TYK2P29597 1187 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ARHGAP19Q14CB8 494 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 TAF1BQ53T94 588 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 PERM1Q5SV97 790 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 WDR74Q6RFH5 385 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 RAPH1Q70E73 1250 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 TBC1D1Q86TI0 1168 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 OR5AR1Q8NGP9 310 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 MCOLN3Q8TDD5 553 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 ACMSDQ8TDX5 336 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 LCN9Q8WX39 176 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 GRAMD1AQ96CP6 724 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 LINGO1Q96FE5 620 aa13.45□□□□□ -0.26
NSMCE1-201ENST00000361439 PKNOX2Q96KN3 472 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms