RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 MYH15Q9Y2K3 1946 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 TCAF2A6NFQ2 919 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PAX3P23760 479 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 GABARAPL2P60520 117 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CRTC2Q53ET0 693 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 STEAP4Q687X5 459 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PLEKHG7Q6ZR37 379 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CFAP52Q8N1V2 620 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 C2CD4AQ8NCU7 369 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 SEZ6LQ9BYH1 1024 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PTPRJQ12913 1337 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MYH3P11055 1940 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MYH10P35580 1976 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CHRNA1P02708 482 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PCSK2P16519 638 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 HOXD12P35452 270 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MAP2K4P45985 399 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 RABGGTBP53611 331 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 MRPS6P82932 125 aaKnown RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 VGLL4Q14135 290 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 TAF1AQ15573 450 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 GSDMCQ9BYG8 508 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MAF1Q9H063 256 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PAK6Q9NQU5 681 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 EIF3KQ9UBQ5 218 aaKnown RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 CICQ96RK0 1608 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 LRP6O75581 1613 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MSCO60682 206 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CKBP12277 381 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 GSTM2P28161 218 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 DGKQP52824 942 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 SYPL2Q5VXT5 272 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 ITIH5Q86UX2 942 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 YAF2Q8IY57 180 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 HEPHQ9BQS7 1158 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 LAMA4Q16363 1823 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 GLYATL1P3A0A0U1RQE8 302 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 GSAPA4D1B5 854 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PDHXO00330 501 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 OR5F1O95221 314 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 ANXA8P13928 327 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CXCR2P25025 360 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 MAPKAPK2P49137 400 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 SNRPD1P62314 119 aaKnown RBP13.72□□□□□ -0.21
SMC5-201ENST00000361138 MTAPQ13126 283 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 BORAQ6PGQ7 559 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 AMBNQ9NP70 447 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
SMC5-201ENST00000361138 ITGB1P05556 798 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 PBX3P40426 434 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 PLD1Q13393 1074 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 CYS1Q717R9 158 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 COPS8Q99627 209 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 OSGEPL1Q9H4B0 414 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 FBRSL1Q9HCM7 1045 aaKnown RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 MYH7P12883 1935 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 AP3D1O14617 1153 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 PRAMEF1O95521 474 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 BMP7P18075 431 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 MANFP55145 182 aaKnown RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 C6orf141Q5SZD1 244 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 HECTD3Q5T447 861 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 FAM180AQ6UWF9 173 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 PCDHGA3Q9Y5H0 932 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 PGK1P00558 417 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 CXCR3P49682 368 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.71□□□□□ -0.21
SMC5-201ENST00000361138 CNIH3Q8TBE1 160 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 RACGAP1Q9H0H5 632 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 ZFYVE1Q9HBF4 777 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 SACM1LQ9NTJ5 587 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.21
SMC5-201ENST00000361138 YJEFN3A6XGL0 299 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 CREG1O75629 220 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 IFNA7P01567 189 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 CDKL1Q00532 357 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms