RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 STYXQ8WUJ0 223 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 SMIM30A4D0T7 59 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 TSPAN1O60635 241 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 APOL3O95236 402 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 IL7RP16871 459 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 NDUFA9Q16795 377 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 FAM174BQ3ZCQ3 159 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF311Q5JNZ3 666 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 SWT1Q5T5J6 900 aaKnown RBP15.79■□□□□ 0.12
COL18A1-203ENST00000359759 COLEC10Q9Y6Z7 277 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 LRRC10BA6NIK2 292 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 RPP14O95059 124 aaKnown RBP15.79■□□□□ 0.12
COL18A1-203ENST00000359759 VNN2O95498 520 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 EDNRAP25101 427 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 SLC13A2Q13183 592 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 BRMS1LQ5PSV4 323 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 ADGRD1Q6QNK2 874 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 FIBCD1Q8N539 461 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 IL31RAQ8NI17 732 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 SLC16A10Q8TF71 515 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 HEXDCQ8WVB3 486 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 KREMEN1Q96MU8 473 aa15.79■□□□□ 0.12
COL18A1-203ENST00000359759 SCELO95171 688 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 OR1D2P34982 312 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MAP3K8P41279 467 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 DGKEP52429 567 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SPIN3Q5JUX0 258 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PLCZ1Q86YW0 608 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 C17orf50Q8WW18 174 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PTPRMP28827 1452 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 C13orf42A0A1B0GVH6 325 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MANSC4A6NHS7 340 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PPEF2O14830 753 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PRMT3O60678 531 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PLA2G16P53816 162 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 FSTL4Q6MZW2 842 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SERPINA9Q86WD7 417 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PHC2Q8IXK0 858 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 OR2L2Q8NH16 312 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 INPP4AQ96PE3 977 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 TCAF2A6NFQ2 919 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 A8MV72 311 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF878C9JN71 531 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 CXCL11O14625 94 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MEIS2O14770 477 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF12P17014 697 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 NDUFV1P49821 464 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 CREMQ03060 361 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MAPK14Q16539 360 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SLC9A9Q8IVB4 645 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 COX18Q8N8Q8 333 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 OAZ2O95190 189 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MT-CYBP00156 380 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ADH1AP07327 375 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 TMPRSS9Q7Z410 1059 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SDR16C5Q8N3Y7 309 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SMG7Q92540 1137 aaKnown RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF700Q9H0M5 742 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 TCAF1Q9Y4C2 921 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF536O15090 1300 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 A0A0G2JN53 185 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 NPR2P20594 1047 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ODF4Q2M2E3 257 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 NAPRTQ6XQN6 538 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 SPAG16Q8N0X2 631 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 C1orf216Q8TAB5 229 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF285Q96NJ3 590 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 MSRAQ9UJ68 235 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PRELID1Q9Y255 219 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 PCDHGC4Q9Y5F7 938 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 LAPTM5Q13571 262 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 ARFRP1Q13795 201 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 GALNT13Q8IUC8 556 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 RC3H2Q9HBD1 1191 aaKnown RBP15.78■□□□□ 0.12
COL18A1-203ENST00000359759 FBXL3Q9UKT7 428 aa15.78■□□□□ 0.12
COL18A1-203ENST00000359759 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 LCP2Q13094 533 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 GXYLT1Q4G148 440 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 PHPT1Q9NRX4 125 aaPredicted RBP15.77■□□□□ 0.12
COL18A1-203ENST00000359759 ARL5AQ9Y689 179 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 I3L521 148 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 UGT1A9O60656 530 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 ALPPP05187 535 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 COL6A2P12110 1019 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 TUBG1P23258 451 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 CLCN7P51798 805 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 PRR5P85299 388 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 PARP15Q460N3 678 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 FAM76BQ5HYJ3 339 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 ATXN7L2Q5T6C5 722 aaPredicted RBP15.77■□□□□ 0.12
COL18A1-203ENST00000359759 HFE2Q6ZVN8 426 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 CPNE9Q8IYJ1 553 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 C8orf48Q96LL4 319 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 NSMCE3Q96MG7 304 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 UGT1A7Q9HAW7 530 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 UGT1A10Q9HAW8 530 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 UGT1A8Q9HAW9 530 aa15.77■□□□□ 0.12
COL18A1-203ENST00000359759 FARSAQ9Y285 508 aaKnown RBP15.77■□□□□ 0.12
COL18A1-203ENST00000359759 ACOX3O15254 700 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms