RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SSX3Q99909 188 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC1A7O00341 560 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SOCS2O14508 198 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DNASE1P24855 282 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PTPN3P26045 913 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PKLRP30613 574 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GJA9P57773 515 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM62Q0P6H9 643 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SNTA1Q13424 505 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GRM2Q14416 872 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CLCA4Q14CN2 919 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 LIX1Q8N485 282 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MAP10Q9P2G4 905 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PDCD5O14737 125 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SGCEO43556 437 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 AP1G1O43747 822 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 AP2A1O95782 977 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CLCQ05315 142 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CCDC58Q4VC31 144 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 FAM76BQ5HYJ3 339 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC35B2Q8TB61 432 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 NFKBIZQ9BYH8 718 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ABCB8Q9NUT2 735 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MFSD11O43934 449 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF7P17097 686 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CSTF2P33240 577 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PITPNAQ00169 270 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 IRF8Q02556 426 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PIGFQ07326 219 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PTPRNQ16849 979 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 IGDCC3Q8IVU1 814 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CDK20Q8IZL9 346 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GAL3ST3Q96A11 431 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ACTR10Q9NZ32 417 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DNAJC5BQ9UF47 199 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TCRBV7S3A2A0A539 114 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 C1orf196B1AJZ1 125 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ANXA8P13928 327 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC1A2P43004 574 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TEX44Q53QW1 395 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 AGAP6Q5VW22 663 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MSANTD1Q6ZTZ1 278 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 AGAP4Q96P64 663 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GBA3Q9H227 469 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 BEX1Q9HBH7 125 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 LACTBL1A8MY62 500 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 DCLK1O15075 740 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ENTPD3O75355 529 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NDST3O95803 873 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HMGN1P05114 100 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CYP2A7P20853 494 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ATP4BP51164 291 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PLCZ1Q86YW0 608 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 AZIN2Q96A70 460 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TXNDC15Q96J42 360 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 BARD1Q99728 777 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHB16Q9NRJ7 776 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HOXC10Q9NYD6 342 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TEX46H3BTG2 121 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 APOC1P02654 83 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PTX3P26022 381 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GTF2E2P29084 291 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RPL3P39023 403 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SLC11A2P49281 568 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GTF2A2P52657 109 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LAMTOR4Q0VGL1 99 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GRSF1Q12849 480 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GON7Q9BXV9 100 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SLC25A13Q9UJS0 675 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NID2Q14112 1375 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 WRBO00258 174 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 INPPL1O15357 1258 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 UGT2B17O75795 530 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PRKCHP24723 683 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HERVK_113P63132 956 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GBE1Q04446 702 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SLC22A8Q8TCC7 542 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CSGALNACT1Q8TDX6 532 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZBTB45Q96K62 511 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ERVK-6Q9BXR3 956 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ABI2Q9NYB9 513 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TCAF2A6NFQ2 919 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ALX3O95076 343 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 EPORP19235 508 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PRKACGP22612 351 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GALEQ14376 348 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NFE2L1Q14494 772 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 AP5B1Q2VPB7 878 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 UAP1L1Q3KQV9 507 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RABL3Q5HYI8 236 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 OR8K3Q8NH51 312 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RFKQ969G6 155 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 FAM126AQ9BYI3 521 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 POLR2J2Q9GZM3 115 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SOX17Q9H6I2 414 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LRTM1Q9HBL6 345 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHGA7Q9Y5G6 932 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HMX3A6NHT5 357 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PAPSS2O95340 614 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms