RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 DCLRE1AQ6PJP8 1040 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TRAPPC5Q8IUR0 188 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 KLHL36Q8N4N3 616 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 KLHL6Q8WZ60 621 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 MRPS31Q92665 395 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 AARSD1Q9BTE6 412 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ARCN1P48444 511 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 XKP51811 444 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 METTL3Q86U44 580 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 OR2L5Q8NG80 312 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 APOLD1Q96LR9 279 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF641Q96N77 438 aaPredicted RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 COL21A1Q96P44 957 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ADAMTS6Q9UKP5 1117 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHB1Q9Y5F3 818 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHGB3Q9Y5G1 929 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 SPIN1Q9Y657 262 aaPredicted RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TCAF2A6NFQ2 919 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ECHS1P30084 290 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 IRF9Q00978 393 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 FAM91A1Q658Y4 838 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TRMT10BQ6PF06 316 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RHBDF2Q6PJF5 856 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 BEND5Q7L4P6 421 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ZUFSPQ96AP4 578 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 SMURF2Q9HAU4 748 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TEX264Q9Y6I9 313 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TECPR2O15040 1411 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 POU2F1P14859 743 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 DNAJB1P25685 340 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HTR7P34969 479 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MRPS5P82675 430 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ZMYND11Q15326 602 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 FAM171BQ6P995 826 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 RTL4Q6ZR62 310 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SYVN1Q86TM6 617 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 KCNC2Q96PR1 638 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 OSMRQ99650 979 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ACO2Q99798 780 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 BCL7BQ9BQE9 202 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HEPHQ9BQS7 1158 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PDCD2LQ9BRP1 358 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 RPF2Q9H7B2 306 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SGK2Q9HBY8 427 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TCAF1Q9Y4C2 921 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TIMM22Q9Y584 194 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SLC9A3R1O14745 358 aaPredicted RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CAV3P56539 151 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ATP6AP1Q15904 470 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ASB18Q6ZVZ8 466 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 THAP6Q8TBB0 222 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PARK7Q99497 189 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HNRNPABQ99729 332 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CCDC32Q9BV29 185 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF780BQ9Y6R6 833 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 LAMB4A4D0S4 1761 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PRPS2P11908 318 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 EPCAMP16422 314 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 IL7RP16871 459 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 BDNFP23560 247 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ALG11Q2TAA5 492 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 IFI44LQ53G44 452 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CCBE1Q6UXH8 406 aaPredicted RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GLOD4Q9HC38 313 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHGB6Q9Y5F9 930 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 KDM3BQ7LBC6 1761 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SLC25A12O75746 678 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 INSRRP14616 1297 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 FSHRP23945 695 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MC4RP32245 332 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 THPOP40225 353 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF460Q14592 562 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SNAP47Q5SQN1 464 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TLDC1Q6P9B6 456 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 AMIGO1Q86WK6 493 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 OXR1Q8N573 874 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PRICKLE1Q96MT3 831 aaPredicted RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PIKFYVEQ9Y2I7 2098 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MAFKO60675 156 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 RFPL1O75677 317 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 OGFRL1Q5TC84 451 aaPredicted RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HDDC3Q8N4P3 179 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 C2orf69Q8N8R5 385 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 OR5J2Q8NH18 312 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HASPINQ8TF76 798 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MYOZ2Q9NPC6 264 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TNFSF13BQ9Y275 285 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 RPH3AQ9Y2J0 694 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms