RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 KCNN3Q9UGI6 736 aa5.72□□□□□ -1.49
BRCA1-203ENST00000357654 TAGLN3Q9UI15 199 aa5.72□□□□□ -1.49
BRCA1-203ENST00000357654 PMF1-BGLAPU3KQ54 211 aa5.72□□□□□ -1.49
BRCA1-203ENST00000357654 CDC42BPBQ9Y5S2 1711 aa5.72□□□□□ -1.49
BRCA1-203ENST00000357654 B4GAT1O43505 415 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 RNF13O43567 381 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SCO2O43819 266 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 UNC5CO95185 931 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CD79AP11912 226 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 PKMP14618 531 aaKnown RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CCNB1P14635 433 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 PRLRP16471 622 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 PVALBP20472 110 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CALB2P22676 271 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CAPGP40121 348 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 RABGGTBP53611 331 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CDK18Q07002 472 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 NPRL3Q12980 569 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 ARSIQ5FYB1 569 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF782Q6ZMW2 699 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 GK5Q6ZS86 529 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CREG2Q8IUH2 290 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 YIPF7Q8N8F6 280 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 STAG3L4Q8TBR4 150 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SGCZQ96LD1 299 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 NECAB3Q96P71 396 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CYP2S1Q96SQ9 504 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 UCKL1Q9NWZ5 548 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 FBXL12Q9NXK8 326 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 IFT80Q9P2H3 777 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CRNNQ9UBG3 495 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 GPR34Q9UPC5 381 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 C2CD2Q9Y426 696 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 BLOC1S5-TXNDC5H3BN57 136 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 ABCB7O75027 752 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CRYZL1O95825 349 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CCL5P13501 91 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 KLRK1P26718 216 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 RTP1P59025 263 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF445P59923 1031 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 PLA2G7Q13093 441 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 HES1Q14469 280 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SSX2Q16385 188 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SLC18A3Q16572 532 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 MANEAQ5SRI9 462 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 GPRIN3Q6ZVF9 776 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 USP53Q70EK8 1073 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 TXNRD3Q86VQ6 643 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SNX32Q86XE0 403 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 OR6Y1Q8NGX8 325 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CAVIN3Q969G5 261 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 NUS1Q96E22 293 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 TSSK3Q96PN8 268 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CITED4Q96RK1 184 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 WDR12Q9GZL7 423 aaKnown RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.49
BRCA1-203ENST00000357654 ZDHHC3Q9NYG2 299 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 IL36AQ9UHA7 158 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 CAMK2AQ9UQM7 478 aa5.71□□□□□ -1.49
BRCA1-203ENST00000357654 SOX1O00570 391 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SLC37A4O43826 429 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 NRP2O60462 931 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TP53P04637 393 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 UROSP10746 265 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CYP11B2P19099 503 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 EPHA3P29320 983 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 VHLP40337 213 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 MDH1P40925 334 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GABRA2P47869 451 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CHRNEQ04844 493 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FASTKD3Q14CZ7 662 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 IGFN1Q86VF2 1251 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 KIF18BQ86Y91 864 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PXYLP1Q8TE99 480 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CD101Q93033 1021 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 B3GALT6Q96L58 329 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PURBQ96QR8 312 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FKRPQ9H9S5 495 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF701Q9NV72 531 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 KCND2Q9NZV8 630 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TVP23AA6NH52 213 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SULT1B1O43704 296 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 IPO13O94829 963 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FARS2O95363 451 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 KLF8O95600 359 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 EDNRAP25101 427 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PBX3P40426 434 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CTSKP43235 329 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TSFMP43897 325 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FSTL1Q12841 308 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 C1orf61Q13536 156 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CLEC12AQ5QGZ9 265 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 NAPRTQ6XQN6 538 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GPR180Q86V85 440 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF410Q86VK4 478 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM86AQ8N2M4 240 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF676Q8N7Q3 588 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SCGB1C1Q8TD33 95 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms