RNA–Protein interactions for RNA: ENST00000357052.7

RAB4B-201, Transcript of RAB4B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4B, Length 1,133 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-201ENST00000357052 CDKN2AIPNLQ96HQ2 116 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 MRFAP1L1Q96HT8 127 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 TRAPPC9Q96Q05 1148 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 NRTNQ99748 197 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 NLNQ9BYT8 704 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 PITPNM3Q9BZ71 974 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 SLC7A5P2Q9GIP4 190 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 XKR8Q9H6D3 395 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 ACTR5Q9H9F9 607 aaPredicted RBP14.35□□□□□ -0.11
RAB4B-201ENST00000357052 SMARCAL1Q9NZC9 954 aa14.35□□□□□ -0.11
RAB4B-201ENST00000357052 TTLL8A6PVC2 850 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 PSMD3O43242 534 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 METTL18O95568 372 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 MSL3P1P0C860 447 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 RORAP35398 523 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 CD97P48960 835 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 ITGA1P56199 1179 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 BOP1Q14137 746 aaKnown RBP14.34□□□□□ -0.11
RAB4B-201ENST00000357052 DBN1Q16643 649 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 MICALCLQ6ZW33 695 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 ADGRF3Q8IZF5 1079 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 FAM26EQ8N5C1 309 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 KLHL25Q9H0H3 589 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 PIH1D1Q9NWS0 290 aaKnown RBP14.34□□□□□ -0.11
RAB4B-201ENST00000357052 ACTR10Q9NZ32 417 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 TCFL5Q9UL49 500 aa14.34□□□□□ -0.11
RAB4B-201ENST00000357052 PCDHGA9Q9Y5G4 932 aaKnown RBP14.34□□□□□ -0.11
RAB4B-201ENST00000357052 CLEC18AA5D8T8 446 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 MIF4GDA9UHW6 222 aaKnown RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 E7EQ34 232 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 QSOX1O00391 747 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 LIN7AO14910 233 aaPredicted RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 AP2A1O95782 977 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 PVRP15151 417 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 NSG1P42857 185 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 PTGIRP43119 386 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 ITIH4Q14624 930 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 ZNF789Q5FWF6 425 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 SPESP1Q6UW49 350 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 CLEC18BQ6UXF7 455 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 GPR135Q8IZ08 494 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 SYCE1Q8N0S2 351 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 CLEC18CQ8NCF0 446 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 ADAMTS17Q8TE56 1095 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 N4BP2L2Q92802 583 aaPredicted RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 MLXIPLQ9NP71 852 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 R3HDM2Q9Y2K5 976 aaKnown RBP14.33□□□□□ -0.12
RAB4B-201ENST00000357052 PRSS21Q9Y6M0 314 aa14.33□□□□□ -0.12
RAB4B-201ENST00000357052 ANKRD12Q6UB98 2062 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 CCDC78A2IDD5 438 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 MROH6A6NGR9 719 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 C9J4A7 227 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 ZNF749O43361 778 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 VPS4BO75351 444 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 TMEM63AO94886 807 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 FTCDO95954 541 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 FTH1P02794 183 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 HBQ1P09105 142 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 MSNP26038 577 aaKnown RBP14.32□□□□□ -0.12
RAB4B-201ENST00000357052 GDF10P55107 478 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 BRD3Q15059 726 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 FAM198BQ6UWH4 519 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 CDHR3Q6ZTQ4 885 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 LINC00523Q86TU6 105 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 TXLNBQ8N3L3 684 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 TAB3Q8N5C8 712 aaPredicted RBP14.32□□□□□ -0.12
RAB4B-201ENST00000357052 OR5AR1Q8NGP9 310 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 SLC35B2Q8TB61 432 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 ELMO1Q92556 727 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 DPH2Q9BQC3 489 aaPredicted RBP14.32□□□□□ -0.12
RAB4B-201ENST00000357052 VPS4AQ9UN37 437 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 ICKQ9UPZ9 632 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 ZNF451Q9Y4E5 1061 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 HIVEP3Q5T1R4 2406 aa14.32□□□□□ -0.12
RAB4B-201ENST00000357052 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
RAB4B-201ENST00000357052 SPENQ96T58 3664 aaKnown RBP14.31□□□□□ -0.12
RAB4B-201ENST00000357052 CCDC88CQ9P219 2028 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 FER1L5A0AVI2 2057 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 GAS8O95995 478 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 CAPN1P07384 714 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 UGT2B7P16662 529 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 AGXTP21549 392 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 PSMA3P25788 255 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 SHMT2P34897 504 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 PLOD1Q02809 727 aaPredicted RBP14.31□□□□□ -0.12
RAB4B-201ENST00000357052 KIF5AQ12840 1032 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 KLF1Q13351 362 aaPredicted RBP14.31□□□□□ -0.12
RAB4B-201ENST00000357052 NCF4Q15080 339 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 CCDC38Q502W7 563 aa14.31□□□□□ -0.12
RAB4B-201ENST00000357052 FAM69BQ5VUD6 431 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms