RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 C6orf10Q5SRN2 563 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 L3HYPDHQ96EM0 354 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 RNPEPL1Q9HAU8 725 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 ZNF490Q9ULM2 529 aaPredicted RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 PCDHGB5Q9Y5G0 923 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 E7EQ34 232 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 MRASO14807 208 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 VCLP18206 1134 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 DGKAP23743 735 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 TRAF3Q13114 568 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 SELPLGQ14242 412 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 GLYATL1Q969I3 302 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 TTYH1Q9H313 450 aaPredicted RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 COPS7BQ9H9Q2 264 aaPredicted RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 SLC6A13Q9NSD5 602 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 DLGAP4Q9Y2H0 992 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 WASHC1A8K0Z3 465 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 SEC22BO75396 215 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 CD22P20273 847 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 RGS4P49798 205 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 MTA1Q13330 715 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 THEMIS2Q5TEJ8 643 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 WASH2PQ6VEQ5 465 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 AMIGO2Q86SJ2 522 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 GALNT4Q8N4A0 578 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 KYQ8NBH2 561 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 CCL4L1Q8NHW4 92 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 OR8D1Q8WZ84 308 aa13.56□□□□□ -0.24
LSS-201ENST00000356396 MRPL1Q9BYD6 325 aaKnown RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 CNOT6Q9ULM6 557 aaKnown RBP13.56□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3DA0A087WVF3 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3IA0A087WXS9 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3EA0A087X179 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3KA0A087X1G2 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TRBV5-4A0A0C4DH59 114 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3FA6NER0 549 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3LB9A6J9 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 NME6O75414 186 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3HP0C7X1 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 AOAHP28039 575 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 SKIV2L2P42285 1042 aaKnown RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3GQ6DHY5 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3CQ6IPX1 549 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 CES5AQ6NT32 575 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 PHYKPLQ8IUZ5 450 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TBC1D3Q8IZP1 549 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 MMP21Q8N119 569 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 MAP10Q9P2G4 905 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 SEC16AO15027 2179 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 SNRNP200O75643 2136 aaKnown RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 PFDN6O15212 129 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 ESRRBO95718 433 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 PDYNP01213 254 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 ACP5P13686 325 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 PEX2P28328 305 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 PTK2BQ14289 1009 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 C10orf111Q8N326 155 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 RHEBL1Q8TAI7 183 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 BTN2A2Q8WVV5 523 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 APOLD1Q96LR9 279 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 ZNF641Q96N77 438 aaPredicted RBP13.55□□□□□ -0.24
LSS-201ENST00000356396 GDF15Q99988 308 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
LSS-201ENST00000356396 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 ASPDHA6ND91 283 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 PPM1DO15297 605 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 STK16O75716 305 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 ZNF189O75820 626 aaPredicted RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 ETHE1O95571 254 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 HOXA9P31269 272 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 ATP6V0D1P61421 351 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PPP2CBP62714 309 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms