RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 IQCCQ4KMZ1 466 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 C17orf64Q86WR6 236 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 P2RY11Q96G91 374 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 RHOJQ9H4E5 214 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF451Q9Y4E5 1061 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 DIP2AQ14689 1571 aa10.87□□□□□ -0.67
GTF3C1-201ENST00000356183 TRBV23OR9-2A0A075B6M9 112 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CYB5AP00167 134 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RPS3P23396 243 aaKnown RBP eCLIP10.86□□□□□ -0.672e-6■■■□□ 16.7
GTF3C1-201ENST00000356183 PDX1P52945 283 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MLLT6P55198 1093 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ELAVL2Q12926 359 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SYVN1Q86TM6 617 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 C1QTNF3-AMACRE9PGA6 284 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SAP18O00422 153 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ACKR2O00590 384 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RP2O75695 350 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 NTSR2O95665 410 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 HOXB6P17509 224 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MAGEA8P43361 318 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 XKP51811 444 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 LIMK2P53671 638 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC9B1Q4ZJI4 515 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC26A9Q7LBE3 791 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 DNAJB7Q7Z6W7 309 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SIDT2Q8NBJ9 832 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 DNERQ8NFT8 737 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 BRSK1Q8TDC3 778 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 C10orf82Q8WW14 230 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 AZIN2Q96A70 460 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TESCQ96BS2 214 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 IPPKQ9H8X2 491 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 BTBD19C9JJ37 291 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 M0QX08 132 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 XYLBO75191 536 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CYP11A1P05108 521 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 C2P06681 752 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 IL12BP29460 328 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 AXLP30530 894 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC10A7Q0GE19 358 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SYT16Q17RD7 645 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 LRRN1Q6UXK5 716 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 NCCRP1Q6ZVX7 275 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TDRPQ86YL5 185 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MCEMP1Q8IX19 187 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 FAXDC2Q96IV6 333 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ALKBH4Q9NXW9 302 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 UBQLN2Q9UHD9 624 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CYTH4Q9UIA0 394 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF225Q9UK10 706 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 KIF20BQ96Q89 1820 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RPP14O95059 124 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 GPR89BP0CG08 455 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 HSD3B1P14060 373 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RYKP34925 604 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MAPK14Q16539 360 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ZACNQ401N2 412 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC22A15Q8IZD6 547 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 NDRG1Q92597 394 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RIPOR3Q96MK2 946 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 FARSBQ9NSD9 589 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 PDLIM1O00151 329 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 EI24O14681 340 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 IFNA21P01568 189 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TFPTP0C1Z6 253 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF16P17020 682 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC6A4P31645 630 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 MECP2P51608 486 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RPL26P61254 145 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TLE2Q04725 743 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 BATFQ16520 125 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 FAM46CQ5VWP2 391 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 PHF13Q86YI8 300 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 GPR21Q99679 349 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 GTPBP2Q9BX10 602 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ITPAQ9BY32 194 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 DCSTAMPQ9H295 470 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 ABCD2Q9UBJ2 740 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CDRT1O95170 752 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CD2P06729 351 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SCNN1GP51170 649 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 HFE2Q6ZVN8 426 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 GRHL3Q8TE85 626 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 CDT1Q9H211 546 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TBCCD1Q9NVR7 557 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 TAS2R3Q9NYW6 316 aa10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-201ENST00000356183 SCELO95171 688 aa10.85□□□□□ -0.67
GTF3C1-201ENST00000356183 IFI44LQ53G44 452 aa10.85□□□□□ -0.67
GTF3C1-201ENST00000356183 TMEM236Q5W0B7 351 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms