RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 COMMD3Q9UBI1 195 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 CARD8Q9Y2G2 431 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 COMMD3-BMI1R4GMX3 469 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 AFF1P51825 1210 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SLC3A1Q07837 685 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TARDBPQ13148 414 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 GANABQ14697 944 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 PDGFRLQ15198 375 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 MMABQ96EY8 250 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 MTERF1Q99551 399 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 MYCLP1P12525 358 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 MAGEA3P43357 314 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 GPC2Q8N158 579 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TRPV4Q9HBA0 871 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SNX15Q9NRS6 342 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 GDI1P31150 447 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 KIR3DL1P43629 444 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 GLUD2P49448 558 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 HEPACAMQ14CZ8 416 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF554Q86TJ5 538 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 LMX1AQ8TE12 382 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 NPLQ9BXD5 320 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 B3GAT2Q9NPZ5 323 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SDHAF3Q9NRP4 125 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 PRRC2BQ5JSZ5 2229 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 AURKAO14965 403 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 PSMG1O95456 288 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 NTSR2O95665 410 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 CD53P19397 219 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SPAM1P38567 509 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 RABGGTBP53611 331 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SNU13P55769 128 aaKnown RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 CRTC2Q53ET0 693 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TBC1D21Q8IYX1 336 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SFRP1Q8N474 314 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 KLHL15Q96M94 604 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 B3GNT5Q9BYG0 378 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 STOX2Q9P2F5 926 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TEX13CA0A0J9YWL9 993 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 ARPC2O15144 300 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 PRAMEF1O95521 474 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TYRP1P17643 537 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 VAMP1P23763 118 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 SLC7A6OSQ96CW6 309 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-201ENST00000356083 VCPIP1Q96JH7 1222 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 VWA7Q9Y334 891 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 A6NLC8 198 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 NPIPA5E9PKD4 350 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 MLLT6P55198 1093 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 LRRC32Q14392 662 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 OTOP3Q7RTS5 596 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ARHGAP20Q9P2F6 1191 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 NPIPA1Q9UND3 350 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 AP4B1Q9Y6B7 739 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CMC1Q7Z7K0 106 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 TRAPPC6BQ86SZ2 158 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CDH19Q9H159 772 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 BCAS3Q9H6U6 928 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ATPIF1Q9UII2 106 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 C2CD2Q9Y426 696 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 EVPLQ92817 2033 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 SHBGP04278 402 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 PRKCGP05129 697 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ITGA2BP08514 1039 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 FAM76BQ5HYJ3 339 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 LCN1P1Q5VSP4 162 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 MREGQ8N565 214 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 OR2T12Q8NG77 320 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 HEXDCQ8WVB3 486 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CDT1Q9H211 546 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GSTT2BP0CG30 244 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 KIAA1161Q6NSJ0 714 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CARS2Q9HA77 564 aaKnown RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 A6NCN8 305 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 NDUFS4O43181 175 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GRM3Q14832 879 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CCSER2Q9H7U1 834 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GDF3Q9NR23 364 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 PRNPP04156 253 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 PPIBP23284 216 aaKnown RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 C6orf52Q5T4I8 152 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 RNASEH2BQ5TBB1 312 aaKnown RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 GPR139Q6DWJ6 353 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ABHD13Q7L211 337 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ZBTB2Q8N680 514 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 NLGN4YQ8NFZ3 816 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 TNFRSF25Q93038 417 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CYP2S1Q96SQ9 504 aa16.98■□□□□ 0.31
COL27A1-201ENST00000356083 CLK4Q9HAZ1 481 aaKnown RBP16.98■□□□□ 0.31
COL27A1-201ENST00000356083 ABCB8Q9NUT2 735 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms