RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NR4A2P43354 598 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ACLYP53396 1101 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 EPHB3P54753 998 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 STARD3Q14849 445 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CRY1Q16526 586 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF671Q8TAW3 534 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 SUSD3Q96L08 255 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ATG10Q9H0Y0 220 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 DCSTAMPQ9H295 470 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 SMURF2Q9HAU4 748 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF99A8MXY4 864 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ACSL4O60488 711 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 GUCY1B2O75343 617 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 MTX2O75431 263 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 NDST2P52849 883 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CDKN2DP55273 166 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 HMGCS1Q01581 520 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 PIWIL3Q7Z3Z3 882 aaKnown RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 DEFB118Q96PH6 123 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CNPPD1Q9BV87 410 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 MBLAC1A4D2B0 266 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 GABRB3P28472 473 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 HCAR3P49019 387 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CENPAP49450 140 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CASP9P55211 416 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 PON2Q15165 354 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 TRIM71Q2Q1W2 868 aaKnown RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF697Q5TEC3 545 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 FAM180AQ6UWF9 173 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 RASAL3Q86YV0 1011 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 GINS4Q9BRT9 223 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-202ENST00000355815 FAIMQ9NVQ4 179 aa13.83□□□□□ -0.2
SREBF1-202ENST00000355815 CAPN14A8MX76 684 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SDHDO14521 159 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZW10O43264 779 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ITPKAP23677 461 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CDKN1CP49918 316 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CDC42P60953 191 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ACSM2AQ08AH3 577 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ELAVL2Q12926 359 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ANKDD1AQ495B1 522 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 UBE2UQ5VVX9 321 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ACSM2BQ68CK6 577 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SCD5Q86SK9 330 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 NKAPQ8N5F7 415 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GPR156Q8NFN8 814 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ASCC3Q8N3C0 2202 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 RFXANKO14593 260 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SLC7A4O43246 635 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 RGS14O43566 566 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ALDH1A1P00352 501 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 C4BPBP20851 252 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SPIBQ01892 262 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SULT2A1Q06520 285 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GRB7Q14451 532 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 NPTX1Q15818 432 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF549Q6P9A3 640 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 BHLHB9Q6PI77 547 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GHDCQ8N2G8 530 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 BRSK1Q8TDC3 778 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 UROC1Q96N76 676 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 TMEM246Q9BRR3 403 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZBTB26Q9HCK0 441 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 MIEF1Q9NQG6 463 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 TLR6Q9Y2C9 796 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 HSPB11Q9Y547 144 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 I6L893 689 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GABRDO14764 452 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CASKO14936 926 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 S100A9P06702 114 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 CDH1P12830 882 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF24P17028 368 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 GABRR2P28476 465 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 TTPAP49638 278 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 RPS3AP61247 264 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 FKBP1BP68106 108 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 PTSQ03393 145 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 IL18Q14116 193 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF267Q14586 743 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 HERC3Q15034 1050 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 C5orf22Q49AR2 442 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF544Q6NX49 715 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 AFTPHQ6ULP2 937 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 MAVSQ7Z434 540 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 R3HCC1LQ7Z5L2 792 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■■■ 27.5
SREBF1-202ENST00000355815 FBXO22Q8NEZ5 403 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms