RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 KIF17Q9P2E2 1029 aa10.65□□□□□ -0.7
SND1-201ENST00000354725 REV1Q9UBZ9 1251 aa10.65□□□□□ -0.7
SND1-201ENST00000354725 H0Y626 953 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 DNAJB6O75190 326 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 DEAF1O75398 565 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 RPL10P27635 214 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 CYP2C18P33260 490 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 SERPINB5P36952 375 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 CRYBB1P53674 252 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 IRF9Q00978 393 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZMYND11Q15326 602 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 Q5BKY6 102 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 RTN4RL1Q86UN2 441 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 PGAM4Q8N0Y7 254 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ACVR1CQ8NER5 493 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 CA5BP1Q8WTZ4 195 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 KCTD13Q8WZ19 329 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 PGAP3Q96FM1 320 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 SLC9A7Q96T83 725 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 AGO3Q9H9G7 860 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 ZBTB26Q9HCK0 441 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 TINAGQ9UJW2 476 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 RAP2CQ9Y3L5 183 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 KLF2Q9Y5W3 355 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ERI2A8K979 691 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 LTFP02788 710 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 VTNP04004 478 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 PTPN3P26045 913 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 SOX9P48436 509 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 MAPK10P53779 464 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TMBIM6P55061 237 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 UBE3AQ05086 875 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 BNIP2Q12982 314 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.64□□□□□ -0.711e-6■■■□□ 17
SND1-201ENST00000354725 DCAF4L1Q3SXM0 396 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 OR2T3Q8NH03 318 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 STYXQ8WUJ0 223 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TESCQ96BS2 214 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 C9orf16Q9BUW7 83 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 GATA5Q9BWX5 397 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 LRRC40Q9H9A6 602 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 COPS7BQ9H9Q2 264 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 TRPM5Q9NZQ8 1165 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 PSME2Q9UL46 239 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 NEU3Q9UQ49 428 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ANKRD6Q9Y2G4 727 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 MED16Q9Y2X0 877 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TRIM13O60858 407 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZNF26P17031 533 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 HTR7P34969 479 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 SLC13A2Q13183 592 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 CEACAM7Q14002 265 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 TSTD2Q5T7W7 516 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZNF425Q6IV72 752 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 DSELQ8IZU8 1212 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ZCCHC7Q8N3Z6 543 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 HMGCLL1Q8TB92 370 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 PHOSPHO2Q8TCD6 241 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 PDCD6IPQ8WUM4 868 aaKnown RBP10.64□□□□□ -0.71
SND1-201ENST00000354725 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 DLG3Q92796 817 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 FOXJ1Q92949 421 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 SNAPC3Q92966 411 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 LPPQ93052 612 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 CRB3Q9BUF7 120 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ACPTQ9BZG2 426 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 POLR1BQ9H9Y6 1135 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 ACOXLQ9NUZ1 547 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 HPF1Q9NWY4 346 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 GLTPQ9NZD2 209 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TRPV2Q9Y5S1 764 aa10.64□□□□□ -0.71
SND1-201ENST00000354725 TTC3P53804 2025 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 NDST3O95803 873 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 AMHP03971 560 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 SPRP35270 261 aaPredicted RBP10.63□□□□□ -0.71
SND1-201ENST00000354725 HNF4AP41235 474 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 LEPRP48357 1165 aaKnown RBP10.63□□□□□ -0.71
SND1-201ENST00000354725 MS4A2Q01362 244 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 BRMS1LQ5PSV4 323 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 C9orf57Q5W0N0 161 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 ZCCHC12Q6PEW1 402 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 TBC1D19Q8N5T2 526 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 CNTD1Q8N815 330 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 BADQ92934 168 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 ZNF597Q96LX8 424 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 ZNF578Q96N58 590 aaPredicted RBP10.63□□□□□ -0.71
SND1-201ENST00000354725 AGAP2Q99490 1192 aa10.63□□□□□ -0.71
SND1-201ENST00000354725 CDADC1Q9BWV3 514 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms