RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PIGFQ07326 219 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 SFSWAPQ12872 951 aaKnown RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 DUSP4Q13115 394 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ZNF177Q13360 481 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ATP1A4Q13733 1029 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ZCCHC7Q8N3Z6 543 aaKnown RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ZBTB8BQ8NAP8 495 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ABHD11Q8NFV4 315 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 TBCDQ9BTW9 1192 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 FARSBQ9NSD9 589 aaKnown RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 C3orf18Q9UK00 162 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 PKP3Q9Y446 797 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 SCN8AQ9UQD0 1980 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 FAM220BPB1ANY3 271 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 FFAR3O14843 346 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 GPR42O15529 346 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 BCAS1O75363 584 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 PCMT1P22061 227 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 RPS3P23396 243 aaKnown RBP eCLIP24.04■■□□□ 1.443e-8■■■□□ 18.5
CPNE1-202ENST00000352393 BCAP31P51572 246 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 GTDC1Q4AE62 458 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 MFSD14CQ5VZR4 134 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 GRAMD4Q6IC98 578 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ADHFE1Q8IWW8 467 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 EID3Q8N140 333 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 LKAAEAR1Q8TD35 194 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 CIPCQ9C0C6 399 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 PAK1IP1Q9NWT1 392 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 LHX3Q9UBR4 397 aa24.04■■□□□ 1.44
CPNE1-202ENST00000352393 WARS2Q9UGM6 360 aaKnown RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 ZNF106Q9H2Y7 1883 aaKnown RBP24.04■■□□□ 1.44
CPNE1-202ENST00000352393 C1orf232A0A0U1RR37 186 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 LOC100130705A0A1B0GUX0 176 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 A0A1B0GVM2 712 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 WDR47O94967 919 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 GJB5O95377 273 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 PRAMEF12O95522 483 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 GUCA1CO95843 209 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 PIK3CGP48736 1102 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CCR3P51677 355 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 HMGCS1Q01581 520 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 MBTPS1Q14703 1052 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 RGS21Q2M5E4 152 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 PTRHD1Q6GMV3 140 aaKnown RBP24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CCSAPQ6IQ19 270 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CXorf57Q6NSI4 855 aaKnown RBP24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CRTC3Q6UUV7 619 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 SUSD1Q6UWL2 747 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CERS6Q6ZMG9 384 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 TRIM46Q7Z4K8 759 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 IGFN1Q86VF2 1251 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 CALHM3Q86XJ0 350 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 KRTCAP2Q8N6L1 136 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 UBTD2Q8WUN7 234 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 FBLIM1Q8WUP2 373 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 DGCR6LQ9BY27 220 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 KAT8Q9H7Z6 458 aaKnown RBP24.03■■□□□ 1.44
CPNE1-202ENST00000352393 TMEFF2Q9UIK5 374 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-202ENST00000352393 BAG5Q9UL15 447 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 INVSQ9Y283 1065 aa24.03■■□□□ 1.44
CPNE1-202ENST00000352393 HS6ST1O60243 411 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 FZD6O60353 706 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 ATP6V1G1O75348 118 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 KLKB1P03952 638 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 GP2P55259 537 aaKnown RBP24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CBX3Q13185 183 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CACHD1Q5VU97 1274 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 RNF219Q5W0B1 726 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-202ENST00000352393 ATG9BQ674R7 924 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 NIPAL1Q6NVV3 410 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 LINGO4Q6UY18 593 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CCDC138Q96M89 665 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 FAM126AQ9BYI3 521 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CLPBQ9H078 707 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CWH43Q9H720 699 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 ZFP14Q9HCL3 533 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 SNX5Q9Y5X3 404 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 SLC16A6O15403 523 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CREG1O75629 220 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 IL1RNP18510 177 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 GNPDA1P46926 289 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 IL18R1Q13478 541 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 PHKG1Q16816 387 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 TRAF7Q6Q0C0 670 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 ANKRD13BQ86YJ7 626 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CHPFQ8IZ52 775 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 PARP8Q8N3A8 854 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 ZNF566Q969W8 418 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 NODALQ96S42 347 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CPPED1Q9BRF8 314 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-202ENST00000352393 CD244Q9BZW8 370 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 LRTM1Q9HBL6 345 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 SLC6A13Q9NSD5 602 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 MARCH5Q9NX47 278 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 OPTCQ9UBM4 332 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 KLQ9UEF7 1012 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 TRPS1Q9UHF7 1281 aa24.02■■□□□ 1.44
CPNE1-202ENST00000352393 GAPDHSO14556 408 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-202ENST00000352393 RYKP34925 604 aa24.01■■□□□ 1.43
CPNE1-202ENST00000352393 HMGCLP35914 325 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms