RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 OR2T3Q8NH03 318 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 SKA2Q8WVK7 121 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 SLCO4A1Q96BD0 722 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 HIST1H2AHQ96KK5 128 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 HIST1H2AJQ99878 128 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 H2AFJQ9BTM1 129 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 SLC29A3Q9BZD2 475 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 TRANK1O15050 2925 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 IFRD1O00458 451 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 MANBAO00462 879 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 ST8SIA6P61647 398 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 YBX1P67809 324 aaKnown RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 MAD2L1Q13257 205 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 LRRC70Q7Z2Q7 622 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 TRIM15Q9C019 465 aa19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 ZNF490Q9ULM2 529 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 POLR3HQ9Y535 204 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-202ENST00000348639 FADS2P1A8MWK0 482 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 PLXNA2O75051 1894 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 TULP3O75386 442 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 CLDN9O95484 217 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 FTH1P02794 183 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 SLC2A4P14672 509 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 EPORP19235 508 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 ATP6V1B2P21281 511 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 JAK1P23458 1154 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 MMP12P39900 470 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 ZNF284Q2VY69 593 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 FAM78AQ5JUQ0 283 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 DPP10Q8N608 796 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 DNAJB14Q8TBM8 379 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 BTN2A2Q8WVV5 523 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 ASZ1Q8WWH4 475 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 USP7Q93009 1102 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 UHRF1Q96T88 793 aaPredicted RBP19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 EFHD1Q9BUP0 239 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 FARSBQ9NSD9 589 aaKnown RBP19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 DLGAP2Q9P1A6 1054 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 ACTR3BQ9P1U1 418 aa19.91■□□□□ 0.78
CHRNA3-202ENST00000348639 PABPN1LA6NDY0 278 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 AQP12BA6NM10 295 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ARNTLO00327 626 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 QSOX1O00391 747 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 LYNP07948 512 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 GRIA3P42263 894 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 MESP2Q0VG99 397 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ZXDCQ2QGD7 858 aaPredicted RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ERAP2Q6P179 960 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 AQP12AQ8IXF9 295 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ETFBKMTQ8IXQ9 262 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 GOLM1Q8NBJ4 401 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ELMO1Q92556 727 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 VPS35Q96QK1 796 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 MYCBPQ99417 103 aaPredicted RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 EIF3LQ9Y262 564 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 DPPA5A6NC42 116 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 RNASEH1O60930 286 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 UBTFL6P0CB48 400 aaPredicted RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 CYP2A7P20853 494 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 GNPDA1P46926 289 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 SLC6A12P48065 614 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 AP1S2P56377 157 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 RPL38P63173 70 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 FOLH1Q04609 750 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 HABP4Q5JVS0 413 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 LDLRAP1Q5SW96 308 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 LCN8Q6JVE9 175 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 LIPIQ6XZB0 460 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 PRR23BQ6ZRT6 265 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 KIAA2013Q8IYS2 634 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 MCOLN3Q8TDD5 553 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 BPIFB1Q8TDL5 484 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 FAM83CQ9BQN1 747 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 MUC13Q9H3R2 512 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ACTR8Q9H981 624 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 ARMC1Q9NVT9 282 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 SLAMF8Q9P0V8 285 aa19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 CNOT11Q9UKZ1 510 aaKnown RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 NUP210Q8TEM1 1887 aaPredicted RBP19.9■□□□□ 0.78
CHRNA3-202ENST00000348639 C15orf38-AP3S2A0A0A6YYH1 394 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 SLCO2B1O94956 709 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 KRT6AP02538 564 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 KRT6BP04259 564 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 ELFN1P0C7U0 828 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 CASP2P42575 452 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 KRT6CP48668 564 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 EEFSECP57772 596 aaKnown RBP19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 ERVK-21P61565 698 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 HMGCS1Q01581 520 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 GGTA1PQ4G0N0 100 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 RABL3Q5HYI8 236 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 PARS2Q7L3T8 475 aaKnown RBP19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 ARPINQ7Z6K5 226 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 RASGRP3Q8IV61 690 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 NPAS3Q8IXF0 933 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 RGL4Q8IZJ4 473 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 LRTOMTQ8WZ04 291 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 P2RY13Q9BPV8 354 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 ALG2Q9H553 416 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 ASIC5Q9NY37 505 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms