RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SNX32Q86XE0 403 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 MYO1HQ8N1T3 1032 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 TWIST2Q8WVJ9 160 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 WDR60Q8WVS4 1066 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 DLG3Q92796 817 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 MRPL38Q96DV4 380 aaKnown RBP9.06□□□□□ -0.96
ATG4A-202ENST00000345734 C19orf60Q96EN9 201 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ASB2Q96Q27 587 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 MYADMQ96S97 322 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 CDCA3Q99618 268 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-202ENST00000345734 C1QTNF3Q9BXJ4 246 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 TUBB1Q9H4B7 451 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 FAM83DQ9H4H8 585 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ZFP14Q9HCL3 533 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 NUDT4Q9NZJ9 180 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 DKK3Q9UBP4 350 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 GIMAP2Q9UG22 337 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF225Q9UK10 706 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 L3MBTL1Q9Y468 752 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 RGSL1A5PLK6 1076 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ENO4A6NNW6 628 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 E2F3O00716 465 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PIP5K1BO14986 540 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PEX11AO75192 247 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 WFS1O76024 890 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TM7SF2O76062 418 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 GUCA1CO95843 209 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 FGF4P08620 206 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 NAT1P18440 290 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 AKT1P31749 480 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CCR7P32248 378 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 MMP12P39900 470 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RGS4P49798 205 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PCDH1Q08174 1060 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 DYNC1I2Q13409 638 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 KPNB1Q14974 876 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PDGFRLQ15198 375 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RBBP7Q16576 425 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PHKG1Q16816 387 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 KHDC1Q4VXA5 237 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 WASHC2DQ5SRD0 308 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ZDHHC20Q5W0Z9 365 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ANKRD54Q6NXT1 300 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 SERPINA13PQ6UXR4 307 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CHSY3Q70JA7 882 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 LARP4Q71RC2 724 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CCDC80Q76M96 950 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 DPPA4Q7L190 304 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ADAMTSL2Q86TH1 951 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 SCUBE1Q8IWY4 988 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ULK2Q8IYT8 1036 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 GALNT15Q8N3T1 639 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 DCBLD1Q8N8Z6 715 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 SNX31Q8N9S9 440 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 HMGCLL1Q8TB92 370 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ARRDC3Q96B67 414 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ULK4Q96C45 1275 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 LRIG1Q96JA1 1093 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 KXD1Q9BQD3 176 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 HGH1Q9BTY7 390 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 WRAP53Q9BUR4 548 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RIOK2Q9BVS4 552 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TRIM4Q9C037 500 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 FBRSL1Q9HCM7 1045 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 THG1LQ9NWX6 298 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 NKX1-2Q9UD57 310 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CDH7Q9ULB5 785 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 BTRCQ9Y297 605 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TIMM22Q9Y584 194 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TNRC18O15417 2968 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 A0A088AWK7 358 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CCDC85CA6NKD9 419 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 FADS2P1A8MWK0 482 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 LCE2BO14633 110 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 AIM2O14862 343 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 FFAR2O15552 330 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 MAGEC1O60732 1142 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF24P17028 368 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 GJA4P35212 333 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 OPRD1P41143 372 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 GAS6Q14393 721 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF234Q14588 700 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RAB30Q15771 203 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 HNRNPA1L2Q32P51 320 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 HENMT1Q5T8I9 393 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 MBOAT1Q6ZNC8 495 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TECPR1Q7Z6L1 1165 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 DDIASQ8IXT1 998 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 LZICQ8WZA0 190 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 CHFRQ96EP1 664 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 RTKNQ9BST9 563 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 NSUN3Q9H649 340 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 AKTIPQ9H8T0 292 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 PAPOLBQ9NRJ5 636 aaKnown RBP9.05□□□□□ -0.96
ATG4A-202ENST00000345734 OBP2AQ9NY56 170 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 TMCO1Q9UM00 188 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 COQ6Q9Y2Z9 468 aa9.05□□□□□ -0.96
ATG4A-202ENST00000345734 DOCK9Q9BZ29 2069 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms