RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PWP1Q13610 501 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 DLEU7Q6UYE1 221 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 DPP9Q86TI2 863 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 KRT73Q86Y46 540 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 ZBTB8OSQ8IWT0 167 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 YIPF7Q8N8F6 280 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 ASB15Q8WXK1 588 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 TMEM209Q96SK2 561 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 TUBB1Q9H4B7 451 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 RNF121Q9H920 327 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 SPON1Q9HCB6 807 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 ZC4H2Q9NQZ6 224 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 SLAMF8Q9P0V8 285 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 IFNA16P05015 189 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 LINC00032P0C843 101 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 IFI30P13284 250 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 TSPAN8P19075 237 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 PRKACGP22612 351 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 KRT20P35900 424 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 CBX5P45973 191 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 FKBP1AP62942 108 aaKnown RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 SHEQ5VZ18 495 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 AHSA2Q719I0 299 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 CARS2Q9HA77 564 aaKnown RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ATP6V1HQ9UI12 483 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 PCDHB5Q9Y5E4 795 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ANK1P16157 1881 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 USP2O75604 605 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ITGB3P05106 788 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 PRKCBP05771 671 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 HOXB1P14653 301 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-201ENST00000342245 TNFSF8P32971 234 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 UFM1P61960 85 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ANKRD34AQ69YU3 496 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 LAIR1Q6GTX8 287 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 TMEM179BQ7Z7N9 219 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 FAM162AQ96A26 154 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 RHBDF1Q96CC6 855 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 AP2M1Q96CW1 435 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF583Q96ND8 569 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 ACOX2Q99424 681 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 COPS4Q9BT78 406 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 PRKD2Q9BZL6 878 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 FBXO10Q9UK96 956 aa18.18■□□□□ 0.5
SMPD1-201ENST00000342245 A0A087WZ62 844 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 LOC100506127A0A0U1RQW1 187 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 CRCPO75575 148 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 RECQL5O94762 991 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ADORA3P0DMS8 318 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ERVK-8P63133 956 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 SMARCB1Q12824 385 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 LAPTM5Q13571 262 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 SIM2Q14190 667 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 NKG7Q16617 165 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 MLIPQ5VWP3 458 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 RAP1GAP2Q684P5 730 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 OR4M2Q8NGB6 313 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 CRELD1Q96HD1 420 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ALG9Q9H6U8 611 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 PLCXD1Q9NUJ7 323 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 MAFBQ9Y5Q3 323 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 A8MX80 341 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 E5RI56 91 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 TFECO14948 347 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 MUSKO15146 869 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 SCO1O75880 301 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 STAU1O95793 577 aaKnown RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 MGAT3Q09327 533 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 QPRTQ15274 297 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 FAM214AQ32MH5 1076 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ATP6AP1LQ52LC2 224 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ZBTB37Q5TC79 503 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 KIAA1614Q5VZ46 1190 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 RNF130Q86XS8 419 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 FAM86B1Q8N7N1 296 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 TTC29Q8NA56 475 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 HPDLQ96IR7 371 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 TEX37Q96LM6 180 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 TEKT5Q96M29 485 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 WDFY2Q96P53 400 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 PPP1R2P1Q96PQ5 205 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF302Q9NR11 478 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 OLA1Q9NTK5 396 aaKnown RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 PTGDR2Q9Y5Y4 395 aa18.17■□□□□ 0.5
SMPD1-201ENST00000342245 DICER1Q9UPY3 1922 aaKnown RBP18.17■□□□□ 0.5
SMPD1-201ENST00000342245 SLC35F4A4IF30 521 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 NT5C1B-RDH14C9J2C7 533 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PAPSS2O95340 614 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-201ENST00000342245 PFKLP17858 780 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 CHRNA5P30532 468 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 HYAL2Q12891 473 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 SLC25A52Q3SY17 297 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 TRIM60Q495X7 471 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 KDM4DQ6B0I6 523 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 ISCA2Q86U28 154 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 CDH24Q86UP0 819 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 CDYL2Q8N8U2 506 aa18.16■□□□□ 0.5
SMPD1-201ENST00000342245 ELMO1Q92556 727 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms