RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 PDX1P52945 283 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PMS2P54278 862 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 ADARP55265 1226 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 OR52E1Q8NGJ3 308 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 LCN9Q8WX39 176 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 KCNJ9Q92806 393 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 KLHL25Q9H0H3 589 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 TAS2R13Q9NYV9 303 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 VWA7Q9Y334 891 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 COLEC10Q9Y6Z7 277 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 KIF1CO43896 1103 aaKnown RBP12.85□□□□□ -0.35
TUBD1-202ENST00000340993 RASSF9O75901 435 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 C1QAP02745 245 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 ADRB1P08588 477 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 E2F1Q01094 437 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 RPA4Q13156 261 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 ILKQ13418 452 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 FRG1Q14331 258 aaKnown RBP12.85□□□□□ -0.35
TUBD1-202ENST00000340993 PLEKHS1Q5SXH7 462 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 MROH9Q5TGP6 573 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 CMC1Q7Z7K0 106 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 CEP97Q8IW35 865 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 PHACTR1Q9C0D0 580 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 KIR3DX1Q9H7L2 352 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 SPTBP11277 2137 aa12.85□□□□□ -0.35
TUBD1-202ENST00000340993 PCM1Q15154 2024 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 KLHL33A6NCF5 533 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CAPN5O15484 640 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 DKK1O94907 266 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SLCO2B1O94956 709 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 GSTM1P09488 218 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 GP5P40197 560 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SLC12A2P55011 1212 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 TAS2R39P59534 338 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 GSTM4Q03013 218 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 USP10Q14694 798 aaKnown RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 FAM45BPQ6NSW5 357 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CEP128Q6ZU80 1094 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 FAM45AQ8TCE6 357 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 INPP5DQ92835 1189 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SH3KBP1Q96B97 665 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CCDC74BQ96LY2 380 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 RBBP8Q99708 897 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CPNE1Q99829 537 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 FAM129AQ9BZQ8 928 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 SRMSQ9H3Y6 488 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 ICKQ9UPZ9 632 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 DHRS7Q9Y394 339 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 IGF2RP11717 2491 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 KPNA5O15131 536 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 RIPK2O43353 540 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CPNE6O95741 557 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 MPOP05164 745 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 GSTA2P09210 222 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 PNLIPP16233 465 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 FDXRP22570 491 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 GPR3P46089 330 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 TMEM207Q6UWW9 146 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CCNI2Q6ZMN8 369 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-202ENST00000340993 TRIM73Q86UV7 250 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 OR5K2Q8NHB8 316 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 CYTH2Q99418 400 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 TSPYL1Q9H0U9 437 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 HRASLS2Q9NWW9 162 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 NSMCE4AQ9NXX6 385 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 ADAMTS6Q9UKP5 1117 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 IKZF3Q9UKT9 509 aa12.84□□□□□ -0.35
TUBD1-202ENST00000340993 IGHV5-10-1A0A0J9YXX1 117 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 NPEPPSL1A6NEC2 478 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 ARHGEF33A8MVX0 844 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 BTN3A3O00478 584 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 BTN3A1O00481 513 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 SPAG6O75602 509 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 TPBGLP0DKB5 382 aa12.83□□□□□ -0.36
TUBD1-202ENST00000340993 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms