RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 KCNC2Q96PR1 638 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 COQ3Q9NZJ6 369 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 ARHGEF40Q8TER5 1519 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 SMIM30A4D0T7 59 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 ENTPD6O75354 484 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 CDRT1O95170 752 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 PRAMEF12O95522 483 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 GLDCP23378 1020 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 ZNF616Q08AN1 781 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 ODF4Q2M2E3 257 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 SLC39A12Q504Y0 691 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 FIGNQ5HY92 759 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 RBM48Q5RL73 367 aaKnown RBP12.65□□□□□ -0.38
USP47-202ENST00000339865 REP15Q6BDI9 236 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 PRDM16Q9HAZ2 1276 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 POPDC2Q9HBU9 364 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 OR2S2Q9NQN1 319 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 LPOP22079 712 aaPredicted RBP12.65□□□□□ -0.38
USP47-202ENST00000339865 AVPR1BP47901 424 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 PSEN1P49768 467 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 C17orf64Q86WR6 236 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 FAM13CQ8NE31 585 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
USP47-202ENST00000339865 CENPNQ96H22 339 aaPredicted RBP12.65□□□□□ -0.38
USP47-202ENST00000339865 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
USP47-202ENST00000339865 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.39
USP47-202ENST00000339865 C9JVG2 144 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 NEDD8-MDP1E9PL57 170 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 SLC25A27O95847 323 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 EDNRAP25101 427 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 PER3P56645 1201 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 CLEC6AQ6EIG7 209 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 TCTEX1D2Q8WW35 142 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 APOLD1Q96LR9 279 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 MUC13Q9H3R2 512 aa12.65□□□□□ -0.39
USP47-202ENST00000339865 CSF2P04141 144 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 COL6A2P12110 1019 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CHMP24386 653 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 SLC13A2Q13183 592 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 IQCCQ4KMZ1 466 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CUZD1Q86UP6 607 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 FDXACB1Q9BRP7 624 aaPredicted RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 SMURF2Q9HAU4 748 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CENPMQ9NSP4 180 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ZNF609O15014 1411 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 OR6C74A6NCV1 312 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ELOA3DA6NLF2 546 aaPredicted RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 HHLA1C9JL84 531 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CLDN4O14493 209 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CDH1P12830 882 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CYP2C18P33260 490 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CDH11P55287 796 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 RAB15P59190 212 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 NFATC4Q14934 902 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ELOA3BQ3SY89 546 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 FAM129CQ86XR2 697 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ELOA3Q8NG57 546 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 TBCBQ99426 244 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 TAPBPLQ9BX59 468 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 EBPLQ9BY08 206 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 AMBNQ9NP70 447 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 RCOR3Q9P2K3 495 aaPredicted RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 HCKP08631 526 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 SOX10P56693 466 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 SP3Q02447 781 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 GRB10Q13322 594 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 SEMA3CQ99985 751 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 CTPS2Q9NRF8 586 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 TMPRSS4Q9NRS4 437 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ABCC13Q9NSE7 274 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 UXTQ9UBK9 157 aaPredicted RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 TIMM22Q9Y584 194 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 ASXL2Q76L83 1435 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 AGAP5A6NIR3 686 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 IRF6O14896 467 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
USP47-202ENST00000339865 LIMK2P53671 638 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
USP47-202ENST00000339865 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms